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ecology
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60 search results found
Vegan
⭐
399
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
R Ecology Lesson
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302
Data Analysis and Visualization in R for Ecologists
Sdmtmb
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146
🌎 An R package for spatial and spatiotemporal GLMMs with TMB
Spatialeco
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92
R package for spatial analysis and modelling of ecological systems
Neon Data Skills
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73
Self-paced tutorials that review key data literacy concepts and data analysis skills. Published materials can be found at:
Plant
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51
Trait-Driven Models of Ecology and Evolution 🌲
Lterdatasampler
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46
LTER data samples to teach environmental data science
Glmmfields
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44
R package for Bayesian spatial and spatiotemporal GLMMs with possible extremes
Traitdataform
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29
A package to manage and compile functional trait data into predefined templates
R Package
⭐
24
Repository of the R-packageGen3sis
Infomap_ecology_package
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22
Package with functions to handle network data and run Infomap, inspired by ecological networks
Bbsassistant
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21
An R package for downloading and handling data and information from the North American Breeding Bird Survey.
Nlraa
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21
Nonlinear Regression for Agricultural Applications
Disprity
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21
Measuring disparity with R
Voila
⭐
19
Variational Inference for Langevin Equations
Rmaxent
⭐
19
Tools for working with Maxent in R
Rsmove
⭐
19
Remote Sensing for Movement Ecology
Plotbiomes
⭐
17
R package for plotting Whittaker biomes with ggplot2
Fgeo
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16
[Meta R-package on CRAN] Analyse forest diversity and dynamics
Phylocomr
⭐
15
Phylocom R interface
Assignr
⭐
14
R package for geographic assignment
Austraits.build
⭐
14
Source for AusTraits
Rassta
⭐
14
R package for landscape stratification, sampling, and modeling of environmental phenomena using spatial data in R.
Sdmbench
⭐
13
Benchmarking Species Distribution Models
Spatialwarnings
⭐
13
An R package to compute spatial early-warning signals of ecosystem degradation
Funrar
⭐
12
📦 R package to compute functional rarity indices (functional distinctiveness, uniqueness, restrictedness, scarcity)
Dbhydror
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12
R interface to the South Florida Water Management District's DBHYDRO Database 💦 🌴
Abrupt
⭐
12
Methods for detecting abrupt change in temporal, spatial, and spatiotemporal data series
Scr Stan
⭐
11
Spatial capture-recapture models in Stan
Burnr
⭐
11
🔥 Forest fire history analysis in R.
Relter
⭐
11
An Interface for the 'eLTER' Community
Lagosne
⭐
11
Interface to the LAke multi-scaled GeOSpatial & temporal database 🌎
Ediutils
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10
An API Client for the Environmental Data Initiative Repository
Portalr
⭐
10
A collection of functions to summarize the Portal Data
Birdflowr
⭐
9
BirdFlow R Package
Metacom
⭐
9
R package for the analysis of metacommunity structure
Structuralcoexistence
⭐
9
Shiny app to explore structural approach to species coexistence
Sensiphy
⭐
8
R package to perform sensitivity analysis for comparative methods
Virtualnicher
⭐
8
virtualNicheR: creating virtual fundamental and realised niches
Movedesign
⭐
8
An application that aims to assist researchers in designing animal tracking projects, by considering specific research questions.
Rangemapper
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8
A platform for the study of macroecology of life history traits
Portalcasting
⭐
8
Model development, deployment, and evaluation for forecasting Portal ecosystem dynamics
Alpine_shrub_experiment
⭐
8
Australian Alpine shrub warming experiment and field surveys
Tools Ecology
⭐
8
Galaxy Tools maintained and developed by the GalaxyE community
Mapme.protectedareas
⭐
8
Reproducible workflows in R for processing open geodata to create knowledge about KfW supported protected areas and conservation effectiveness.
Resourceselection
⭐
8
Resource Selection (Probability) Functions for Use-Availability Data in R
Miscmetabar
⭐
7
R package MiscMetabar: Miscellaneous functions for metabarcoding analysis
Ostats
⭐
7
O-statistics (community pairwise niche overlap statistics)
Isoreader
⭐
7
Read IRMS (Isotope Ratio Mass Spectrometry) data files into R
Mqmf
⭐
7
An R package to accompany the new book 'Using R for Modelling and Quantitative Methods in Fisheries'
Neonstore
⭐
7
📦 A local content-based storage system for NEON data
Observdata
⭐
7
Crop Pollination Database
Trawldata
⭐
7
Collate and clean bottom trawl survey data
Riskmapr
⭐
7
Code for riskmapr apps for invasive weed risk mapping
Aoh
⭐
7
Create Area of Habitat Data
Dynamaedes
⭐
7
Model to simulate the population dynamics of four Aedes mosquito species.
Fgeo.data
⭐
6
Open Datasets of ForestGEO
Schmidt_et_al_2016_community_similarity
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5
Analysis code for a manuscript on community similarity computation
Emln
⭐
5
An R package for handling and manipulating multilayer network data, mainly for ecological networks
Smires
⭐
5
Science and Management of Intermittent Rivers and Ephemeral Streams
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