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deseq2
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11 search results found
Tidybulk
⭐
153
Brings bulk and pseudobulk transcriptomics to the tidyverse
Tximport
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128
Transcript quantification import for modular pipelines
Sartools
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87
Statistical Analysis of RNA-Seq Tools
Recount
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40
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
Intro To R With Dge
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40
Rna Seq Tutorial For Gene Differential Expression Analysis
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24
This tutorial is created for educational purpose
Cinar
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10
A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)
Regionreport
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9
Generate HTML report for a set of genomic regions or DESeq2/edgeR results
Deseq2shiny
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8
a web-based R shiny application that wraps DESeq2 R package
Ppcseq
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6
Probabilistic outlier identification for bulk RNA sequencing data
Methods
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5
Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.
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