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Search results for pytorch medical imaging

medical-imaging x

99 search results found

Fastmri ⭐ 1,197

A large-scale dataset of both raw MRI measurements and clinical MRI images.

Medmnist ⭐ 903

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Medicalzoopytorch ⭐ 896

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Breast_cancer_classifier ⭐ 804

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

Torchxrayvision ⭐ 760

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

Medicaltorch ⭐ 724

A medical imaging framework for Pytorch

All About The Gan ⭐ 602

All About the GANs(Generative Adversarial Networks) - Summarized lists for GAN

Monailabel ⭐ 496

MONAI Label is an intelligent open source image labeling and learning tool.

Medical Transformer ⭐ 484

Official Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" - MICCAI 2021

Robot Surgery Segmentation ⭐ 475

Wining solution and its improvement for MICCAI 2017 Robotic Instrument Segmentation Sub-Challenge

Kiu Net Pytorch ⭐ 245

Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI

Lightweight framework for fast prototyping and training deep neural networks with PyTorch and TensorFlow

Deep learning framework for MRI reconstruction

Deeplearing Interview Awesome 2024 ⭐ 196

We'll cover some of the most common Deep Learning Interview Questions and answers and provide detailed answers to help you

Chexnet With Localization ⭐ 181

Weakly Supervised Learning for Findings Detection in Medical Images

Covidprognosis ⭐ 151

COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations

Cbim Medical Image Segmentation ⭐ 148

A PyTorch framework for medical image segmentation

Clinicadl ⭐ 146

Framework for the reproducible processing of neuroimaging data with deep learning methods

Gans_paper_collection ⭐ 132

SegAN: Semantic Segmentation with Adversarial Learning

A generalizable application framework for segmentation, regression, and classification using PyTorch

"pip install unet": PyTorch Implementation of 1D, 2D and 3D U-Net architecture.

Iciar2018 ⭐ 124

Two-Stage Convolutional Neural Network for Breast Cancer Histology Image Classification. ICIAR 2018 Grand Challenge on BreAst Cancer Histology images (BACH)

Fuse Med Ml ⭐ 121

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization

Resunetplusplus With Crf And Tta ⭐ 106

Official implementation of ResUNet++, CRF, and TTA for segmentation of medical images (IEEE JBIHI)

Torchstain ⭐ 100

Stain normalization tools for histological analysis and computational pathology

Quicknat_pytorch ⭐ 99

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

Mirtorch ⭐ 90

A PyTorch-powered differentiable image reconstruction/optimization toolbox

Monai Deploy ⭐ 87

MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.

Open source Python library for building bioimage analysis pipelines

Monai Deploy App Sdk ⭐ 74

MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.

UNet series network architectures (UNet, R2UNet, Attention UNet, Nested UNet, Tiny UNet etc.), combined with joint training of YOLO and other networks

Awesome Computer Vision Resources ⭐ 70

a collection of computer vision projects&tools. 计算机视觉方向项目和工具集合。

Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

Pytomography ⭐ 65

This repository enables easy and fast medical image reconstruction in Python.

Angiodysplasia Segmentation ⭐ 61

Wining solution and its further development for MICCAI 2017 Endoscopic Vision Challenge Angiodysplasia Detection and Localization

Mri Deep Learning Tools ⭐ 58

Resurces for MRI images processing and deep learning in 3D

Lightning Covid19 ⭐ 55

Classification for covid-19 chest X-ray images using Lightning

Image Registration Cnn ⭐ 51

A pytorch implementation of CNN based MRI image registration based on Christodoulidis Stergios et al. "Linear and Deformable Image Registration with 3D Convolutional Neural Networks", 2018.

Open_brats2020 ⭐ 51

Top 10 brats 2020 Solution

[MICCAI'21 & TMI'23] RibSeg Dataset and Point Cloud Baselines for Rib Segmentation from CT Scans

Implementation of the paper: Deep-learning-assisted diagnosis for knee magnetic resonance imaging: Development and retrospective validation of MRNet

Mammography_metarepository ⭐ 43

Meta-repository of screening mammography classifiers

Causal Gen ⭐ 41

(ICML 2023) High Fidelity Image Counterfactuals with Probabilistic Causal Models

Data Consistency Toolbox for Magnetic Resonance Imaging

Kits19 Challenge ⭐ 32

Kidney Tumor Segmentation Challenge 2019

CS-Net (MICCAI 2019) and CS2-Net (MedIA 2020)

Musculoskeletal Radiographs Abnormality Classifier ⭐ 31

An implementation of MURA Dataset Towards Radiologist-Level Abnormality Detection in Musculoskeletal Radiographs

Benchmarktransferlearning ⭐ 30

Official PyTorch Implementation and Pre-trained Models for Benchmarking Transfer Learning for Medical Image Analysis

NeSVoR is a package for GPU-accelerated slice-to-volume reconstruction.

Repository containing the source code of the IVD-Net segmentation network that we proposed for the MICCAI 2018 IVD segmentation challenge.

(ICVGIP' 18 Oral Paper) Classification of thoracic diseases on ChestX-Ray14 dataset

Ccfbdci 2021 Ultrasonic Tumor Segmentation Rank1st ⭐ 28

This is the source code of the 1st place solution for segmentation task (with Dice 90.32%) in 2021 CCF BDCI challenge.

Few Shot Segmentation ⭐ 27

PyTorch implementation of 'Squeeze and Excite' Guided Few Shot Segmentation of Volumetric Scans

Multiresunet ⭐ 26

MultiResUNet implementation in PyTorch; MultiResUNet: Rethinking the U-Net Architecture for Multimodal

3D volume-to-volume generative adversarial network for medical image segmentation

Medical Detection3d Toolkit ⭐ 24

Landmark and object detection engine for 3D medical images

Official and maintained implementation of the paper "OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data" [BMVC 2021].

Nn Common Modules ⭐ 22

Pytorch Implementations of Common modules, blocks and losses for CNNs specifically for segmentation models

Pytorch 3d Medical Image Semantic Segmentation ⭐ 21

3D medical image semantic segmentation with Pytorch.

Official code for Robust T-Loss for Medical Image Segmentation (MICCAI 2023)

Ptl Oar Segmentation ⭐ 20

Boilerplate for PyTorch Lightning based medical-image segmentation pipeline for to enable automated segmentation of organs-at-risk (in head and neck cancer) by using Simple Open-Source 3D CNNS

Subpixel Embedding Segmentation ⭐ 20

PyTorch Implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedding (ORAL, MICCAIW 2021)

Gcam is an easy to use Pytorch library that makes model predictions more interpretable for humans. It allows the generation of attention maps with multiple methods like Guided Backpropagation, Grad-Cam, Guided Grad-Cam and Grad-Cam++.

Covid 19_prognosis ⭐ 19

An artificial intelligence system for predicting the deterioration of COVID-19 patients in the emergency department

Image Recognition System ⭐ 18

✨基于 3D 卷积神经网络(CNN)的阿尔兹海默智能诊断 Web 应用 Alzheimer's Intelligent Diagnosis Web Application based on 3D Convolutional Neural Network and the ADNI Dataset ✨ 🚩(with README in English) 📌含在线demo：医学影像识别系统，图像识别可视化界面，OCR，快速部署深度学习模型为网页应用，W

Chestviewsplit ⭐ 18

Automatically split the chest x-ray into two views

Time-Reversal Algorithm with Finite-Difference Time-Domain Method

CUTS: A Framework for Multigranular Unsupervised Medical Image Segmentation

Deep Learning With Pytorch And Gcp ⭐ 16

Tutorial and framework code for deep learning in biomedical applications with PyTorch and (if necessary) Google Cloud Platform.

Teeth_segmentation ⭐ 13

teeth segmentation using UNet and customize attention module

Lagomorph ⭐ 13

Image Registration and Computational Anatomy in PyTorch

Chest X Ray Module ⭐ 13

3D cerebrovascular volume segmentation in Pytorch.

Icml 2023 Route Interpret Repeat ⭐ 12

Official repository of ICML 2023 paper: Dividing and Conquering a BlackBox to a Mixture of Interpretable Models: Route, Interpret, Repeat

Permutohedral_attention_module ⭐ 12

Large Scale Pretraining Transfer ⭐ 11

Code for reproducing the experiments on large-scale pre-training and transfer learning for the paper "Effect of large-scale pre-training on full and few-shot transfer learning for natural and medical images" (https://arxiv.org/abs/2106.00116)

MIST: A simple, fully automated framework for 3D medical imaging segmentation.

Radtorch ⭐ 11

Official repository for RADTorch - The Medical Imaging Machine Learning Framework

Pytorch Unet ⭐ 11

PyTorch implementation of the UNet model -- https://arxiv.org/abs/1505.04597

Ai_research ⭐ 10

This GitHub repo showcases my AI skills with computer vision and reinforcement learning projects. Detailed documentation and code provided.

Adpkd Segmentation Pytorch ⭐ 10

Segmentation of kidneys on MRI in Autosomal Dominant Polycystic Kidney

Aptos2019 Blindness Detection ⭐ 10

Kaggle 83rd Place (Top 3%) Solution

Uncertainty Estimation Diabeticretinopathy ⭐ 10

Estimating uncertainty of neural networks for automated screening of Diabetic Retinopathy using the PyTorch framework. Generated visual explanation of the deep learning system to convey the pixels in the image that influences its decision Integrated Gradient method.

Official repository for reproducing COVID and Lung segmentation prediction using our MEDSeg model

A PyTorch implementation of image segmentation GAN from the paper "SegAN: Adversarial Network with Multi-scale L1 Loss for Medical Image Segmentation".

Aidsrgan Miccai2022 ⭐ 8

Official Pytorch Code for "Rethinking Degradation: Radiograph Super-Resolution via AID-SRGAN" - MICCAI 2022 Workshop

Miccai Educational Challenge 2019 ⭐ 8

Tutorial about combining PyTorch and NiftyNet for deep learning and medical image computing

Radio-Frequency Ultrasound Localization Microscopy

Residual_mlp_cnn_mixer ⭐ 7

(MICCAI 2022) PyTorch implementation of Denoising of 3D MR images using a voxel-wise hybrid residual MLP-CNN model to improve small lesion diagnostic confidence.

Federated_he ⭐ 7

Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.

Developing a well-documented repository for the Lung Nodule Detection task on the Luna16 dataset. This work is inspired by the ideas of the first-placed team at DSB2017, "grt123".

Dmtnet Crch ⭐ 6

Official Implementation of our paper "Supervision meets Self-Supervision: A Deep Multitask Network for Colorectal Cancer Histopathological Analysis" [Best Paper Award at MISP 2022]

Cancer Instance Segmentation From Tissue ⭐ 6

Tissue Segmentation of Cancer using DeepLabV3 + Resnet101, U-Net, Inception U-Net, RefineNet

Learned Half-Quadratic Splitting Network for Magnetic Resonance Image Reconstruction

Pytorch Unet Brain Cancer Segmentation ⭐ 5

Creating a U-Net In PyTorch to segment the BraTS 2020 dataset

Spatio Temporal Ms Lesion Segmentation ⭐ 5

Code for the paper 'Spatio-temporal Learning from Longitudinal Data for Multiple Sclerosis Lesion Segmentation'

Medicalvision ⭐ 5

A pytorch-based deep learning toolkit for medical image analysis

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