Awesome Open Source

Programming Languages

Search results for python pathogen

11 search results found

Circlator ⭐ 193

A tool to circularize genome assemblies

Antimicrobial Resistance Identification By Assembly

Python3 scripts to manipulate FASTA and FASTQ files

de novo virus assembler of Illumina paired reads

Mandrake ⭐ 34

Mandrake 🌿/👨‍🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding

Pathogentrack ⭐ 22

A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.

Predict plasmids from uncorrected long read data

Gff3toembl ⭐ 20

Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI

Plasmidtron ⭐ 16

Assembling the cause of phenotypes and genotypes from NGS data

Saffrontree ⭐ 14

SaffronTree: Reference free rapid phylogenetic tree construction from raw read data

k-mer based Pipeline to identify the Serotype from Illumina NGS reads

Lodestone ⭐ 11

Mycobacterial pipeline

Minimalsetofviralpeptidome Uniqmin ⭐ 5

An alignment-independent tool for the study of pathogen sequence diversity

Related Searches

Python Django (28,897)

Python Machine Learning (20,195)

Python Flask (17,643)

Python Dataset (14,792)

Python Docker (14,113)

Python Tensorflow (13,736)

Python Command Line (13,351)

Python Deep Learning (13,092)

Python Jupyter Notebook (12,976)

Python Network (11,495)

1-11 of 11 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.