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Search results for python napari
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31 search results found
Napari
⭐
1,986
napari: a fast, interactive, multi-dimensional image viewer for python
Micro Sam
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240
Segment Anything for Microscopy
Napari Animation
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64
A napari plugin for making animations
Napari Micromanager
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54
GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
Napari Hub
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46
Discover, install, and share napari plugins
Napari.github.io
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43
website for the napari image viewer
Napari Matplotlib
⭐
38
Linking napari layers with Matplotlib plots
Napari Skimage Regionprops
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34
Feature extraction for labeled objects in images using regionprops from scikit-image
Cellpose Napari
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33
napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
Napari Aicsimageio
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32
Multiple file format reading directly into napari using pure Python
Napari Omero
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31
Browse your OMERO database from within napari.
Napari_pyclesperanto_assistant
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29
GPU-accelerated general purpose image processing and image analysis in napari
Impy
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28
Speed up coding/extending image analysis in Python.
Napari Spatialdata
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28
Interactive visualization of spatial omics data
Partseg
⭐
28
Tool for segmentation in bioimaging
Automatic Cell Counter
⭐
26
A GUI based on napari for counting cells automatically in cell migration experiments
Cellfinder Napari
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22
Efficient cell detection in large images using cellfinder in napari
Blik
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20
Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
Napari Imagej
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20
Use ImageJ functionality from napari
Napari Allencell Segmenter
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17
A plugin that enables image segmentation provided by Allen Institute for Cell Science
Napari Sc3d Viewer
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16
A plugin to visualise 3D spatial single cell omics
Napatrackmater
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16
Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.
Napari_lattice
⭐
11
Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.
Brainreg Napari
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11
Automated 3D brain registration in napari with support for multiple species and atlases.
Napari Filaments
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9
A napari plugin for filament analysis
Napari Time_series_plotter
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9
A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.
Npe2
⭐
8
napari plugin engine v2
Napari Text Layer
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5
Text layer for bio-image annotation.
Napari Itk Io
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5
File IO with itk for napari.
Napari Blob Detection
⭐
5
napari plugin for blob detection in images
Napari Tiledb Bioimg
⭐
5
TileDB BioImaging plugin for Napari
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