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Search results for python gff

11 search results found

Pygenomeviz ⭐ 177

A genome visualization python package for comparative genomics

Gff3toolkit ⭐ 68

Python programs for processing GFF3 files

Genomegtftools ⭐ 52

convert various features into a GFF-like file for use in genome browsers

Frequently used commands in bioinformatics

Efficiently keep track of changes to genomes

Storf Reporter ⭐ 15

Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named StORFs (Stop - Open Reading Frames)

command lines tool to annotate miRNAs with a standard mirna/isomir naming

Master_gff3_parser ⭐ 14

Convert sequence IDs between ucsc/refseq/genbank

Biodownloader ⭐ 6

📦 A Command Line Tool for downloading protein structures, sequences and MSAs

Gff Toolbox ⭐ 6

Gff-toolbox is a toolbox of commands that enables one to get the gist of their GFF annotation files, as well as to analyse them in different ways.

Addtag Project ⭐ 6

CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.

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