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14 search results found

Lineage ⭐ 114

tools for genetic genealogy and the analysis of consumer DNA test results

mgatk: mitochondrial genome analysis toolkit

Bayesian genotyper for structural variants

Pandas Plink ⭐ 55

PLINK reader for Python.

Support Vector Structural Variation Genotyper

A Python package for pharmacogenomics (PGx) research

A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data

all methods related to Enterobase

Genetic Trait Detector ⭐ 30

This python script detects known traits in raw human genetic data.

Ezancestry ⭐ 28

Easy genetic ancestry predictions in Python

Snpbinner ⭐ 17

SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.

Genotools ⭐ 15

GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comprehensive sample/variant QC, and ancestry estimation. Ideal for computational biology and genetics research.

Pipeline for processing FASTQ data from an Illumina MiSeq to genotype human RNA viruses like HIV and hepatitis C

A simple python library to identify the most likely strain from the population

Genotype Collector And Snp Dataset Creator ⭐ 5

Collecting Genotypes from ENA and make their SNPs

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