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Search results for python ena

5 search results found

Pysradb ⭐ 269

Package for fetching metadata and downloading data from SRA/ENA/GEO

Emblmygff3 ⭐ 57

An efficient way to convert gff3 annotation files into EMBL format ready to submit.

Multisub ⭐ 28

Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.

Enasearch ⭐ 15

A Python library for interacting with ENA's API

Genotype Collector And Snp Dataset Creator ⭐ 5

Collecting Genotypes from ENA and make their SNPs

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