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8 search results found

Python package to study microbial communities using metabolic modeling.

A COBRApy extension for genome-scale models of metabolism and expression (ME-models)

Straindesign ⭐ 27

StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy

An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al

Modelseedpy ⭐ 15

Python package for building and analyzing models using ModelSEED

Reaction Inclusion by Parsimony and Transcript Distribution

Constraint-based modeling of metabolism using Mixed Integer Optimization

Data and tools necessary to construct iJL1678b-ME, a genome-scale model of E. coli K-12 MG1655 metabolism and expression

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