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Samplot ⭐ 458

Plot structural variant signals from many BAMs and CRAMs

Vcfstats ⭐ 48

Powerful statistics for VCF files

Sv Plaudit ⭐ 47

Pipeline for structural variant image curation and analysis.

Structural Variant Prediction Viewer

Gwastoolkit ⭐ 12

A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.

Growth Yield Batch ⭐ 10

An automated process to batch calculate predictions for forest vegetation plots

Quantumclone ⭐ 8

Clonal reconstruction from HTS data

mitochondrial variant analysis tools

Lpqfilter ⭐ 5

This repository contains multiple implementations of quotient filters and linear probing filters which is a variant that does not move remainders within the table.

Forest plot and funnel plot variants for meta-analysis

visual analysis of your VCF files

An R package to create a pretty Copy Number Variant plot from a segments file

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