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Search results for pipeline protein
pipeline
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protein
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32 search results found
Bio_embeddings
⭐
357
Get protein embeddings from protein sequences
Pgap
⭐
263
NCBI Prokaryotic Genome Annotation Pipeline
Entap
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30
Eukaryotic Non-Model Transcriptome Annotation Pipeline - Latest Release v1.0.1
Bitacora
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27
BITACORA: A Bioinformatics tool for gene family annotation
Long Read Proteogenomics
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26
A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
Metasanity
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24
Pipeline for major biological analyses.
Limma Pipeline Proteomics
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21
LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment
Crisprdisco
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21
CRISPR discovery pipeline
Paw_pipeline
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18
A Comet-based, best practices proteomics pipeline.
Shotmap
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17
A Shotgun Metagenome Annotation Pipeline
Pcons Fold
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16
Pipeline for protein folding using PconsC and Rosetta
Sars Cov 2 Proteins
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16
De Stress
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13
DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
Sdrf Pipelines
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12
A repository to convert SDRF proteomics files into pipelines config files
Proxl Web App
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11
ProXL Web App -- Visualize and Share Protein Cross-linking Data
Gomap Singularity
⭐
10
GOMAP-Singularity is the containerized version of GOMAP
Paccmann_sarscov2
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9
Code for paper on automation of discovery and synthesis of targeted molecules: https://iopscience.iop.org/article/10.1088/2632-21
Fgmp
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9
Fungal Genome Mapping Pipeline
Secretsanta
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9
flexible pipelines for scalable secretome prediction, R package
Fa Nf
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9
Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow
Phylostratigraphy
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9
Pipeline for Phylostratigraphy
Poap
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8
Parallelized Open Babel & Autodock suite Pipeline
Multiphate2
⭐
8
multiPhATE with comparative genomics
Lncrna
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8
De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk
Splicify
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8
G2s
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7
A standalone component to provide mappings between protein sequence positions and PDB 3D protein structure models
Aa_subtypes
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7
Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape
E2p2
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7
Genehummus
⭐
6
An Automated Pipeline to Classify Gene Families based on Protein Domain Organization using Auxin Response Factors in Legumes as an Example
Tsppi
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6
Analysis of tissue-specific protein-protein interaction networks
Cathsm Server
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5
Backend server for protein structure modelling pipeline (CATH/SWISS-MODEL)
Pmodel
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5
For modeling genetic variation based on protein domains
Rubble
⭐
5
A blast-based protein homology pipeline
Denovoprediction
⭐
5
De Novo Protein Tertiary Structure Prediction Pipeline
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1-32 of 32 search results
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