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Search results for pipeline mass spectrometry

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6 search results found

Fragpipe ⭐ 149

A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data

Mhcquant ⭐ 28

Identify and quantify MHC eluted peptides from mass spectrometry raw data

Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

metaX: a flexible and comprehensive software for processing omics data.

Sdrf Pipelines ⭐ 12

A repository to convert SDRF proteomics files into pipelines config files

Metaboigniter ⭐ 11

Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.

Denovopipeline ⭐ 10

Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.

Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry data

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1-6 of 6 search results

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