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Search results for ontology

401 search results found

Owl2neo4j ⭐ 41

Convert OWL to labeled property graph and import into Neo4J

Dead_simple_owl_design_patterns ⭐ 40

A simple system for specifying OWL class design patterns for OBO-ish ontologies.

Opendigitaltwins Building ⭐ 40

WillowTwin open digital twin definition language (DTDL) ontology for buildings and real estate

Data transformation framework for LinkML data models

GSSO is the Gender, Sex, and Sex Orientation ontology, including terms related to gender identity and expression, sexual and romantic identity and orientation, and sexual and reproductive behavior.

Ontology Oracle ⭐ 36

The Oracle node and Oracle contract

Ontologies ⭐ 35

Never manage a namespace object map again, scrap typo's for well-known ontologies. Like DefinitelyTyped, but for ontologies.

Nidm Specs ⭐ 34

Neuroimaging Data Model (NIDM): describing neuroimaging data and provenance

Symptomontology ⭐ 34

The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance reported by a patient indicative of a disease”. Understanding the close relationship of Signs and Symptoms, where Signs are the objective observation of an illness, the Symptom Ontology will work to broaden it’s scope to capture and document in a more robust manor these two sets of terms. Understanding that at times, the same term may be both a Sign and a Symp

Graph-based modeling environment for biology, including prototype editor and services

Treetime ⭐ 33

TreeTime is a data organisation, management and analysis tool. A tree is a hierarchical structure that arranges information in units and sub-units. TreeTime uses linked trees (one data item can be part of different distinct trees) to store and organise any general purpose data.

Ontology Enhancement Proposal

Ontouml Models ⭐ 33

The OntoUML/UFO Catalog is a collaborative, structured and open-source catalog of OntoUML and UFO ontology models.

Ontomaton ⭐ 32

OntoMaton facilitates ontology search and tagging functionalities within Google Spreadsheets.

Semantic Sql ⭐ 32

SQL and SQLite builds of OWL ontologies

The source of the W3C Linked Building Data Community Group website https://w3c-lbd-cg.github.io/lbd/

Orthogene ⭐ 31

🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 🐖 🔁 🐐 🔁 🐎 🔁 🐈 🔁 🐕 🔁 🐁 🔁 🐒 🔁 🦧 🔁 🦍 🔁 🏃‍♀️

Agreementmaker ⭐ 31

AgreementMaker Ontology Matching System

Ontology Triones Service Node Security Checklist ⭐ 30

Ontology Triones Service Node security checklist（本体北斗共识集群安全执行指南）

Environmental Exposure Ontology ⭐ 30

Modular environmental exposures ontology

Veda - ontology driven application development platform

Go Annotation ⭐ 29

This repository hosts the tracker for issues pertaining to GO annotations.

Protege Tutorial ⭐ 28

Material for GO OWL/Protege Tutorial

AmiGO is the public interface for the Gene Ontology.

Unified Cybersecurity Ontology ⭐ 28

Unified Cybersecurity Ontology

Entropy-controlled contexts in Python

Shapes Of You ⭐ 28

💠 An index for linked open data & standard knowledge descriptions (ontologies, vocabularies, shapes, queries, mappings)

Excel Add-In for annotation of experimental data and computational workflows.

A modern platform for conlanging. Currently in the planning stage.

Menthor Editor ⭐ 27

Dédalo: Cultural Heritage & Oral History Management System

Wikibonsai ⭐ 27

A jungle gym for thought with an API for the mind.

Emmontopy ⭐ 27

Library for representing and working with ontologies in Python

Etymology ⭐ 26

This repository contains code behind the visualization of the Wikimedia tool etytree at http://tools.wmflabs.org/etytree/

🦉 A lightweight C/C++ library for working with Web Ontology Language (OWL) ontologies

Sparqlprog ⭐ 26

logic programming with SPARQL

Feature Annotation Location Description Ontology

Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)

Specification ⭐ 26

RDF vocabulary and hypermedia specification to publish your Linked Data using search trees

A vocabulary for future-oriented mobility solutions and value-added services supporting them.

BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction

Genealogical Trees ⭐ 25

Semantic Web Exercise: Reasoning and Visualization of the Genealogical Ontologies

Ncbitaxon ⭐ 24

Build for NCBITaxon

Konclude ⭐ 24

Konclude: A parallel, tableau-based, high-performance reasoner for the Description Logic SROIQV(D)/the Web Ontology Language (OWL) 2 DL

Materials Design Ontology ⭐ 24

An Ontology for the Materials Design Domain

Ontology Eventbus ⭐ 24

The Go Language Implementation of Ontology Actor Model

ASAP : Automated Single-cell Analysis Pipeline

Behavior Ontology ⭐ 23

Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes

Ontology Go Sdk ⭐ 23

SDK for Ontology

Ontolearn ⭐ 23

Ontolearn is an open-source software library for explainable structured machine learning in Python. It learns OWL class expressions from positive and negative examples.

Fastobo Py ⭐ 23

Faultless AST for Open Biomedical Ontologies in Python.

Clinical_informatics_umls ⭐ 22

An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being a free UMLS license holder. This repo will subset 2021AB UMLS native release, introduce/build upon UMLS provided tools to load a configured subset into first a relational database --> MySQL, SQLite, PostgreSQL and MariaDB all covered within this repo. Next the UMLS subset which is stored in a relational DB will be queried, modeled and lastly loaded into a defi

OWL and Semantic Web toolkit for Common Lisp, used for construction and reasoning over ontologies and ontology-structured data

Linguistics_problems ⭐ 22

Natural language processing in examples and games

phenol: Phenotype ontology library

Several projects for the Artificial Intelligence course, with topics such as Recommender and Rule-based Systems, Ontologies and Natural Language Processing.

ontology editor built on Owlready2

Interpretme ⭐ 21

An interpretable machine learning pipeline over knowledge graphs

This repository stores the OWL ontology built on the basis of the ISO standards for identification of medicinal products.

Rare Disease Identification ⭐ 21

Rare disease identification from free-text clinical notes with ontologies and weak supervision

CIDO: Coronavirus Infectious Disease Ontology

Faultless AST for Open Biomedical Ontologies.

Curate Gpt ⭐ 20

LLM-driven curation assist tool (pre-alpha)

Opendigitaltwins Assetadminstrationshell ⭐ 20

Provide a DTDL v2 implementation of the Industry 4.0 Asset Administration shell ontology

Thesaurex ⭐ 19

Web based editor for SKOS based ontologies

Ont Converter ⭐ 19

A jvm tool to convert any rdf-ontology to owl2-ontology

an Ontology SDK

Hpo Translations ⭐ 19

Internationalisation of the HPO content

Thymeflow ⭐ 19

Installer for Thymeflow, a personal knowledge management system.

A graphical editor for the specification and visualization of Graphol ontologies

Mental Functioning Ontology ⭐ 19

Ontology for all aspects of human mental functioning

Mammalian Phenotype Ontology ⭐ 19

Standard terms for annotating mammalian phenotypic data

Convention-based Ontology Generation System

Drosophila Anatomy Developmental Ontology ⭐ 18

The home of the Drosophila anatomy ontology

ONT-API (OWL-API over Apache Jena)

Communitiy-based Cell Line Ontology

Unit Ontology ⭐ 17

An ontology of units of measurements

This is the development repository for the STATistics Ontology (STATO). For more information and demonstration on the ontology content, please visit its website:

Multi Drug Embedding ⭐ 17

Method for drug repurposing from knowledge graphs and literature

A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology

The OntoUML Language Documentation.

Autoprotege ⭐ 16

🔧 AutoProtégé是一个面向斯坦福大学开源本体构建工具protege而开发的python操作库，支持海量知识自动化映射和管理

The File Strikes Back

Convert Description Logic axioms into a graph, and generate embedding representation for the nodes.

Simphony Osp ⭐ 16

A framework that aims to achieve interoperability between software such as simulation engines, databases and data repositories using a knowledge graph as the common language.

Typed Ontology ⭐ 16

A unique fusion of ontology ideas, strong Scala type system and Json flexibility

Ontologies ⭐ 16

Home of the Genomic Feature and Variation Ontology (GFVO)

PAV - Provenance Authoring and Versioning ontology

Turning Ontologies Plus Annotation Properties into Vectors

Dosdp Tools ⭐ 15

Utility for working with DOSDP design patterns and OWL ontologies

Helpdesk ⭐ 15

The Gene Ontology Helpdesk

Development of the Gellish Communicator reference application and tools for universal data exchange and data integration supporting Formal English and other Gellish formalized natural languages.

Ontohub Backend ⭐ 15

The main Ontohub service that serves the data for the frontend and other clients via the GraphQL API.

Monarch Disease Ontology Retired ⭐ 15

THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build

Revision Management for the Semantic Web

Mindbase ⭐ 15

A database for convergent intersubjectivity

Vaccine Ontology

Tributech Catalog Api ⭐ 14

Tributech Catalog - Create and manage your DTDL models using our graphical interface and store them using our APIs.

Ontologies ⭐ 14

The eNanoMapper ontology

Ontology ⭐ 14

This repository contains the crisis management ontology for the beAWARE H2020 project along with the relevant documentation.

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