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7 search results found

Biobombe ⭐ 44

BioBombe: Sequentially compressed gene expression features enhances biological signatures

Differential Gene Correlation Analysis

PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data

Graphsim ⭐ 16

R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)

This repository contains the tensorflow implementation of "GNE: A deep learning framework for gene network inference by aggregating biological information"

Netprophet_2.0 ⭐ 11

A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.

Pathcore T Analysis ⭐ 6

This repository is in support of the PathCORE-T paper (https://doi.org/10.1101/147645). It contains all the code and necessary data/metadata to repeat all analyses in the paper.

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