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Search results for matrix cancer genomics
cancer-genomics
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4 search results found
Sigprofilerextractor
⭐
132
SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
Sigprofilerplotting
⭐
43
SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational patterns in cancer genomes. The tool seamlessly integrates with other SigProfiler tools.
Scicone
⭐
20
Single-cell copy number calling and event history reconstruction.
Cross_svm
⭐
7
faster and simpler version of SVM learning software libsvm
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