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7 search results found

QuPath - Bioimage analysis & digital pathology

Histomicstk ⭐ 350

A Python toolkit for pathology image analysis algorithms.

Slideflow ⭐ 193

Deep learning library for digital pathology, with both Tensorflow and PyTorch support.

Axondeepseg ⭐ 112

Axon/Myelin segmentation using Deep Learning

Micaopen ⭐ 58

Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute

Deepslice ⭐ 56

A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.

Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding

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