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Search results for jupyter notebook medical imaging
jupyter-notebook
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medical-imaging
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83 search results found
Learning Deep Learning
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943
Paper reading notes on Deep Learning and Machine Learning
Breast_cancer_classifier
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804
Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening
Torchxrayvision
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760
TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.
Robot Surgery Segmentation
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475
Wining solution and its improvement for MICCAI 2017 Robotic Instrument Segmentation Sub-Challenge
Generativemodels
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445
MONAI Generative Models makes it easy to train, evaluate, and deploy generative models and related applications
Multiresunet
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298
MultiResUNet : Rethinking the U-Net architecture for multimodal biomedical image segmentation
Cascaded Fcn
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283
Source code for the MICCAI 2016 Paper "Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional NeuralNetworks and 3D Conditional Random Fields"
Cucim
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282
cuCIM - RAPIDS GPU-accelerated image processing library
Radio
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186
RadIO is a library for data science research of computed tomography imaging
Unet Segmentation In Keras Tensorflow
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129
UNet is a fully convolutional network(FCN) that does image segmentation. Its goal is to predict each pixel's class. It is built upon the FCN and modified in a way that it yields better segmentation in medical imaging.
Gmic
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119
An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization
Deep Histopath
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92
A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge
Optic Nerve Cnn
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92
Code repository for a paper "Optic Disc and Cup Segmentation Methods for Glaucoma Detection with Modification of U-Net Convolutional Neural Network"
Models
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91
DLTK Model Zoo
Biapy
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85
Open source Python library for building bioimage analysis pipelines
Medtagger
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82
A collaborative framework for annotating medical datasets using crowdsourcing.
Segmentation Of Teeth In Panoramic X Ray Image Using U Net
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75
The aim of this study is automatic semantic segmentation in one-shot panoramic x-ray image by using deep learning method with U-Net Model and binary image analysis in order to provide diagnostic information for the management of dental disorders, diseases, and conditions.
Ctisped
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74
UNet series network architectures (UNet, R2UNet, Attention UNet, Nested UNet, Tiny UNet etc.), combined with joint training of YOLO and other networks
Monai Deploy App Sdk
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74
MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.
Xnet
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71
CNN implementation for medical X-Ray image segmentation
Cnn_design_for_ad
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67
Code for "Generalizable deep learning model for early Alzheimer’s disease detection from structural MRIs"
Darts
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65
Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation
Angiodysplasia Segmentation
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61
Wining solution and its further development for MICCAI 2017 Endoscopic Vision Challenge Angiodysplasia Detection and Localization
Cnn Dicom Segmentation
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57
DICOM Image Segmentation with CNNs in Tensorflow
Fastmonai
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54
Simplifying deep learning for medical imaging
Itksphinxexamples
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50
Cookbook examples for the Insight Toolkit documented with Sphinx
Tutorial Medical Image Registration
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48
Medical Image Registration
Ai Projects For Healthcare
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46
This repository is included artificial intelligence, machine learning, data science, computer vision projects related to healthcare.
Duck Net
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41
Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )
Nocodeseg
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37
🔬 Code-free deep segmentation for computational pathology
Deep Learning Liver Segmentation
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35
Application of Deep Learning to the segmentation of medical images
Aptos2019
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34
43th place (top2%) Solution for Kaggle APTOS 2019 Blindness Detection
Bisqueucsb
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33
An ML Platform for storing, analyzing, and visualizing your data all in the browser.
Mridc
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33
Data Consistency Toolbox for Magnetic Resonance Imaging
M4raw
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33
A multi-contrast multi-repetition multi-channel MRI k-space dataset for low-field MRI research
Bayescap
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32
(ECCV 2022) BayesCap: Bayesian Identity Cap for Calibrated Uncertainty in Frozen Neural Networks
Musculoskeletal Radiographs Abnormality Classifier
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31
An implementation of MURA Dataset Towards Radiologist-Level Abnormality Detection in Musculoskeletal Radiographs
Perception_comparison
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30
Differences between human and machine perception in medical diagnosis
Melanoma_segmentation
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29
Segmentation of skin cancers on ISIC 2017 challenge dataset.
Miqa
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28
A Medical Imaging Quality Assurance tool
Skin Cancer Classification Using Deep Learning
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26
Classify Skin cancer from the skin lesion images using Image classification. The dataset for the project is obtained from the Kaggle SIIM-ISIC-Melanoma-Classification competition.
Coursera Ai For Medicine Specialization
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22
Programming assignments, labs and quizzes from all courses in the Coursera AI for Medicine Specialization offered by deeplearning.ai
Qtim_tutorials
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22
Jupyter notebooks and other tutorials for medical imaging and deep learning, courtesy of the QTIM lab.
Cornerstone_widget
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21
A jupyter widget for the cornerstone library to make showing flashy images with nice tools easier.
Fastmri_prostate
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21
A large scale dataset and reconstruction script of both raw prostate MRI measurements and images
Ptl Oar Segmentation
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20
Boilerplate for PyTorch Lightning based medical-image segmentation pipeline for to enable automated segmentation of organs-at-risk (in head and neck cancer) by using Simple Open-Source 3D CNNS
Covid 19_prognosis
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19
An artificial intelligence system for predicting the deterioration of COVID-19 patients in the emergency department
Spineparsenet
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19
Disease Detection
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17
Aeropath
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16
🫁 AeroPath: An airway segmentation benchmark dataset with challenging pathology
Brain Tumor Segmentation Keras
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16
Keras implementation of the multi-channel cascaded architecture introduced in the paper "Brain Tumor Segmentation with Deep Neural Networks"
Cooperative_training_and_latent_space_data_augmentation
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16
[MICCAI 2021 Oral] Cooperative Training and Latent Space Data Augmentation for Robust Medical Image Segmentation
Medicalimaging
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16
Tutorials that take an in depth look at how to view and manipulate DICOM images and how to get them ready for machine learning
Multimix
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15
MultiMix: Sparingly Supervised, Extreme Multitask Learning From Medical Images (ISBI 2021, MELBA 2021)
Uncertaintyfusenet For Covid 19 Classification
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14
Code implementation of 'UncertaintyFuseNet: Robust Uncertainty-aware Hierarchical Feature Fusion with Ensemble Monte Carlo Dropout for COVID-19 Detection'
Fmi
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14
Additional functionality for use with fastai’s medical imaging module
Transformers_unsupervised_anomaly_segmentation
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14
Transformer-based Models for Unsupervised Anomaly Segmentation in Brain MR Images
Covid 19 Radiology
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12
Covid-19 Radiology
Icml 2023 Route Interpret Repeat
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12
Official repository of ICML 2023 paper: Dividing and Conquering a BlackBox to a Mixture of Interpretable Models: Route, Interpret, Repeat
Dr_2021
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12
Diabetic Retinopathy Feature Extraction and Binary Diagnosis
Dermsynth3d
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11
Official code for "DermSynth3D: Synthesis of in-the-wild Annotated Dermatology Images". A data generation pipeline for creating photorealistic in-the-wild synthetic dermatalogical data with rich multi-task annotations for various skin-analysis tasks..
Mis Ai Accelerator
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11
Google Cloud Medical Imaging ML Development Accelerators
Malaria Detection With Deep Learning
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11
Deep learning based solution to automatically analyze medical images for malaria testing
Large Scale Pretraining Transfer
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11
Code for reproducing the experiments on large-scale pre-training and transfer learning for the paper "Effect of large-scale pre-training on full and few-shot transfer learning for natural and medical images" (https://arxiv.org/abs/2106.00116)
Ai_research
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10
This GitHub repo showcases my AI skills with computer vision and reinforcement learning projects. Detailed documentation and code provided.
Echographs
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10
[MICCAI 2022] The official repository of Light-weight spatio-temporal graphs for segmentation and ejection fraction prediction in cardiac ultrasound. Project page: https://guybenyosef.github.io/EchoGraphs/
Aptos2019 Blindness Detection
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10
Kaggle 83rd Place (Top 3%) Solution
Adpkd Segmentation Pytorch
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10
Segmentation of kidneys on MRI in Autosomal Dominant Polycystic Kidney
Breast Cancer Detection Using Deep Learning
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10
Experiments to show the usage of deep learning to detect breast cancer from breast histopathology images
Oeem
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9
MICCAI 2022: Online Easy Example Mining for Weakly-supervised Gland Segmentation from Histology Images
Detecting Brain Hemorrhage In Computed Tomography Ct Imaging
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9
Computer Vision Model in PyTorch that detects Brain Hemorrhage in Computed Tomography (CT) imaging
Dicom2jpg
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8
A simple Python function tool to convert DICOM files into jpg/png/bmp/tiff files and numpy.ndarray
Miccai Educational Challenge 2019
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8
Tutorial about combining PyTorch and NiftyNet for deep learning and medical image computing
Medicalcnn
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7
Abnormality detection in mammogram images using Deep Convolutional Neural Networks
Intracranial Hemorrhage Detection
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7
Repo to preform intracranial hemorrhage detection using data from Kaggle's RSNA competition
Luna16
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7
Developing a well-documented repository for the Lung Nodule Detection task on the Luna16 dataset. This work is inspired by the ideas of the first-placed team at DSB2017, "grt123".
Blood Cell Subtypes Classification
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7
Using deep learning and CNN model
Medclip
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7
Medical image captioning using OpenAI's CLIP
Brain Tumor Segmentation And Survival Prediction Using Deep Neural Networks
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7
Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.
Dlbcl Morph
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7
DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep learning
Medimage
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7
Python Open-source package for medical images processing and radiomic features extraction.
Cacgan
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6
Classic Augmentation Based Classifier Generative Adversarial Network (CACGAN) for COVID-19 Diagnosis
Nnu Net Bpr Annotations
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6
Code accompanying this dataset: Krishnaswamy, D., Bontempi, D., Clunie, D., Aerts, H. & Fedorov, A. AI-derived annotations for the NLST and NSCLC-Radiomics computed tomography imaging collections. (2022). doi:10.5281/zenodo.7473970
M3dv
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6
Medical 3D Voxel Classifier using DNN
Well Calibrated Regression Uncertainty
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6
Code for our MIDL2020 submission "Well-Calibrated Regression Uncertainty in Medical Imaging with Deep Learning".
Julia_vs_python
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6
A comparison of Julia and Python for medical imaging
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