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Search results for jupyter notebook mass spectrometry

jupyter-notebook x

mass-spectrometry x

14 search results found

Alphamap ⭐ 66

An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.

Alphapeptstats ⭐ 37

Python Package for the downstream analysis of mass-spectrometry-based proteomics data

Proteomicsml ⭐ 33

Community-curated tutorials and datasets for ML in proteomics

Metabolome Annotation Workflow

Alphabase ⭐ 20

Infrastructure of AlphaX ecosystem

Targeted metabolomics with Python

SPIKE a collaborative development for a FT-spectroscopy processing program.

Irs_normalization ⭐ 9

An exploration of internal reference scaling (IRS) normalization in isobaric tagging proteomics experiments.

Candycrunch ⭐ 7

Predicting glycan structure from LC-MS/MS data

Tmt_analysis_examples ⭐ 7

Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.

This framework allows to perform scRNA-seq-like analyses of imaging mass-spectrometry data. Check out the example jupyter-notebook in examples/

Mass Suite ⭐ 6

MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization

A Standardized Dataset-Based Algorithm for Efficient Variation Reduction in Large-Scale DIA MS Data.

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