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Search results for julia genome

14 search results found

Julia for Whole-genome Analysis Software

Pangraph ⭐ 72

A bioinformatic toolkit to align genome assemblies into pangenome graphs

Mentalist ⭐ 33

The MLST pipeline developed by the PathOGiST research group

Genomegraphs.jl ⭐ 29

A modern genomics framework for julia

Rlevectors.jl ⭐ 20

Run Length Encoded vectors for julia, inspired by BioConductor.

Seqmaker.jl ⭐ 19

(No maintenance) Next Generation Sequencing Simulation with SNP, Variation and Sequencing Error Integrated

Ordinalgwas.jl ⭐ 18

Genome-wide association studies (GWAS) for ordered categorical phenotypes

Biograph.jl ⭐ 10

A Julia package for handle genome graph in the GFA format.

Genomicvectors.jl ⭐ 9

Computations on genome locations, inspired by BioConductor.

Ctdnasomaticvariantcall.jl ⭐ 9

Somatic Variant Call for ctDNA

Genomebrowsers.jl ⭐ 8

Grammaticalevolution ⭐ 7

Grammatical Evolution package for Julia.

Pseudoseq.jl ⭐ 6

Fake genomes, fake sequencing, real insights.

Mendelgwas.jl ⭐ 5

This package performs standard Genome-wide Association Studies.

Jseqarray.jl ⭐ 5

JSeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Julia

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