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24 search results found
Catalyst.jl
⭐
402
Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.
Bio.jl
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256
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
Biosequences.jl
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141
Biological sequences for the julia language
Biostructures.jl
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77
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
Mitos.jl
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64
Mutual Information Tools for protein Sequence analysis in Julia
Bioalignments.jl
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51
Sequence alignment tools
Microbiome.jl
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42
For analysis of microbiome and microbial community data
Geneticvariation.jl
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33
Datastructures and algorithms for working with genetic variation
Structuralcausalmodels.jl
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31
Initial look at directed acyclic graph (DAG) based causal models in regression.
Genomegraphs.jl
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29
A modern genomics framework for julia
Biosymbols.jl
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28
Nucleic and amino acid primitive types
Turingpatterns.jl
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26
Turing patterns simulation solver for the GeoStats.jl framework
Reactionnetworkimporters.jl
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25
Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices
Genomicmaps.jl
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13
Julia package for visualising genomic data
Bioinformatics Conf Vids
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13
List of conferences with talk videos posted online
Genefinder.jl
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12
A Gene Finder framework for Julia.
Biocore.jl
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11
Core types and interfaces for BioJulia packages
Genomicannotations.jl
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11
Readdatastores.jl
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10
Datastores for reads, not your papa's FASTQ files.
Biomodelling.jl
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9
Framework for stochastic modelling in systems biology
Julia Theosysbio
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8
Phylogenies.jl
⭐
6
The BioJulia package for working with phylogenetic trees and geneologies.
Sequencevariation.jl
⭐
6
Biological sequence variation
Biomarkovchains.jl
⭐
5
Representing biological sequences as Markov chains
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1-24 of 24 search results
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