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7 search results found

Biojava ⭐ 564

📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.

P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.

Biojava Tutorial ⭐ 111

📖📚An introductory tutorial for BioJava

Mmtf Spark ⭐ 19

Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.

RUPEE: A fast and accurate purely geometric protein structure search

🍃 SiNGA (Simulation of Natural Systems using Graph Automata) is an open-source library containing tools especially for structural bioinformatics and systems biology.

🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data.

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