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6 search results found

Spacexr ⭐ 225

Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics

Spatiallibd ⭐ 53

Code for the spatialLIBD R/Bioconductor package and shiny app

Humanpilot ⭐ 34

Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)

an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial transcriptome references

Spatialdlpfc ⭐ 7

spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

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