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16 search results found
Training Material
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284
A collection of Galaxy-related training material
Sunbeam
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157
A robust, extensible metagenomics pipeline
Computationalgenomicsmanual
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135
Robs manual for the computational genomics and bioinformatics class.
Pb Metagenomics Tools
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127
Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics
Ancientmetagenomedir
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61
Repository containing lists of all published ancient metagenomic (and related) samples and libraries
Metagenomics_summer_school
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43
Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in December
Fastq Screen
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42
Detecting contamination in NGS data and multi-species analysis
Pipeline V5
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19
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
2014 5 Metagenomics Workshop
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18
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
Snikt
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14
Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/bioinformatics/btac389
Functree Ng
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13
An interactive radial tree for functional hierarchies and omics data visualization
Hundo
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11
💯 Snakemake-based amplicon processing protocol for 16S and ITS sequences.
Framework
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10
Open-source opinionated Galaxy-based framework for microbiota analysis
Integratedlearner
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6
Integrated Machine Learning for Multi-omics Classification and Prediction
Minuur
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5
Pipeline to pull microbial reads from WGS data and perform metagenomic analysis
Adrsm
⭐
5
Ancient DNA Read Simulator for Metagenomic
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