Awesome Open Source

Programming Languages

Search results for high throughput sequencing

high-throughput-sequencing x

19 search results found

Hts Nim ⭐ 151

nim wrapper for htslib for parsing genomics data files

Geoparse ⭐ 98

Python library to access Gene Expression Omnibus Database (GEO)

Find and visualize rearrangements in DNA sequences

Bioalignments.jl ⭐ 51

Sequence alignment tools

Fastq_utils ⭐ 29

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

Genoiser ⭐ 16

vSNP -- validate SNPs

mSWEEP High-resolution sweep metagenomics using fast probabilistic inference

mGEMS Genomic epidemiology with mixed samples

Bigwig Nim ⭐ 11

command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig

A toolset for handling sequencing data with unique molecular identifiers (UMIs)

Processing, quality control and analysis of GAM datsets

Assembly of Phylogenomic Datasets from High-Throughput Sequencing data

HTSinfer infers metadata from Illumina high throughput sequencing (HTS) data

Uorf Tools ⭐ 6

uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)

Sargasso disambiguates mixed-species high-throughput sequencing data.

Iggeneusage ⭐ 6

Comparison of gene usage in immune repertoires under different biological conditions

Diff_bum_hmm ⭐ 5

Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, based on an extension of the BUM-HMM method.

basepair bio: a single binary with many useful genomics subtools.

Related Searches

Bioinformatics High Throughput Sequencing (11)

Genomics High Throughput Sequencing (7)

Python High Throughput Sequencing (7)

Nim High Throughput Sequencing (5)

C Plus Plus High Throughput Sequencing (4)

Nim Lang High Throughput Sequencing (3)

Rna Seq High Throughput Sequencing (3)

1-19 of 19 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.