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Search results for genomics genome assembly
genome-assembly
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genomics
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21 search results found
Megahit
⭐
442
Ultra-fast and memory-efficient (meta-)genome assembler
Viral Ngs
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129
Viral genomics analysis pipelines
Redundans
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121
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Mccortex
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86
De novo genome assembly and multisample variant calling
Helen
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52
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
Allhic
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41
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
Haslr
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39
A fast tool for hybrid genome assembly of long and short reads
Indelope
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39
find large indels (in the blind spot between GATK/freebayes and SV callers)
Nam Genomes
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34
Detailed bioinformatics scripts and methods used in the NAM genome paper.
Instagraal
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33
Large genome reassembly based on Hi-C data, continuation of GRAAL
Genomegraphs.jl
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29
A modern genomics framework for julia
Lrsday
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27
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
Treeval
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17
Pipelines for the production of Treeval data
Centroflye
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17
An algorithm for centromere assembly using long error-prone reads
Physlr
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17
⛓️ Construct a Physical Map from Linked Reads
Mgse
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16
Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.
Camsa
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15
CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
Referee
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13
Reference genome quality scores
Berokka
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12
🍊 💫 Trim, circularise and orient long read bacterial genome assemblies
Genomicscourse
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11
For QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomics
Genomeassembly
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5
Implementation of ToL genome assembly workflows
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1-21 of 21 search results
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