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Search results for count genomics

9 search results found

Kmer Cnt ⭐ 106

Code examples of fast and simple k-mer counters for tutorial purposes

Deep learning for single-cell transcript counts

Hts Nim Tools ⭐ 41

useful command-line tools written to show-case hts-nim

Dropclust ⭐ 15

Version 2.1.0 released

Analysing Capture Seq Count Data

Snakemake_rnaseq ⭐ 8

A Snakemake pipeline to go from fastq mRNA sequencing files to raw and normalised counts (usable for downstream EDA and differential analysis)

Kmer Counter ⭐ 8

Count kmers with a more efficient (faster) hash table

Tenxbraindata ⭐ 7

An ExperimentHub package for the 1.3 million brain cell 10X single-cell RNA-seq data set.

Lavalampplot ⭐ 6

instructions, python and R code for generating lava lamp plots of kmer coverage

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