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Search results for genomics computational biology
computational-biology
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genomics
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25 search results found
Seq
⭐
624
A high-performance, Pythonic language for bioinformatics
Deep Rules
⭐
198
Ten Quick Tips for Deep Learning in Biology
Clair3
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191
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
Souporcell
⭐
134
Clustering scRNAseq by genotypes
Czid Web
⭐
75
Infectious Disease Sequencing Platform
Pyfeat
⭐
68
A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences
C.origami
⭐
47
C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.
Liblevenshtein Java
⭐
40
Various utilities regarding Levenshtein transducers. (Java)
Lrsim
⭐
38
10x Genomics Reads Simulator
Bac Genomics Scripts
⭐
28
Collection of scripts for bacterial genomics
Workflows
⭐
28
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
Wdldoc
⭐
26
Create WDL documentation using Markdown.
Mural
⭐
15
MuRaL is a deep learning framework for estimating single-nucleotide mutation rates across the genome.
Pynteny
⭐
13
Query sequence database by HMMs arranged in predefined synteny structure
Clair3 Trio
⭐
12
Clair3-Trio: variant calling in trio using Nanopore long-reads
Sting
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12
Ultrafast sequence typing and gene detection from NGS raw reads
Ngsderive
⭐
10
Forensic analysis tool useful in backwards computing information from next-generation sequencing data.
Positive Selection
⭐
10
Scripts and procedures for detecting positively selected genes and codons in primates
Cvbio
⭐
9
Artisanal 🤣 bioinformatics tools and pipelines in Scala
Bioix
⭐
9
PCA on Genotypes
Deepbio
⭐
8
This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list.
Agebioportal
⭐
7
R Shiny web application for aging-related diseases
Pyfeat 2.x
⭐
6
Biological Feature Representation Tool form the Sequences
Slow5 Rs
⭐
5
Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output
Genbankpy
⭐
5
Tools to download, parse and filter GenBank files
Related Searches
Bioinformatics Genomics (541)
Python Genomics (515)
Genome Genomics (297)
Bioinformatics Computational Biology (201)
1-25 of 25 search results
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