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9 search results found

Metagem ⭐ 155

💎 An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.

Toolbox for including enzyme constraints on a genome-scale model.

A COBRApy extension for genome-scale models of metabolism and expression (ME-models)

An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al

Yarrowia_lipolytica_w29 Gem ⭐ 5

Genome-scale model of Yarrowia lipolytica.

Data and tools necessary to construct iJL1678b-ME, a genome-scale model of E. coli K-12 MG1655 metabolism and expression

Memote M Capsulatus ⭐ 5

Genome-scale metabolic model of Methylococcus capsulatus.

Simulated Evolution ⭐ 5

Artificial Life Simulation of Bacteria Motion depending on DNA

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