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29 search results found
Kent
⭐
197
UCSC Genome Browser source tree. Stable branch: "beta".
Genefuse
⭐
86
Gene fusion detection and visualization
Giab_latest_release
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56
This repository contains information about latest release from Genome in a Bottle project
Pyliftover
⭐
47
Pure-python implementation of UCSC liftOver genome coordinate conversion
Ginkgo
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44
Cloud-based single-cell copy-number variation analysis tool
Tandem Genotypes
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43
Ngs Primerplex
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42
NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design
Last Genome Alignments
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29
Codex2
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29
Full-spectrum copy number variation detection by high-throughput DNA sequencing
1000 Genomes Genetic Maps
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23
Genetic maps interpolated to sites in the 1000 Genomes project
Full_stack_chromhmm_annotations
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20
Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes
Encode Ccres
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18
Pipelines to create and analyze ENCODE candidate cis-Regulatory Elements
Linkedsv
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18
Parsecnv2
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14
Parse Copy Number Variation from Array and Sequencing
About_giab
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13
An introduction about the Genome-in-a-Bottle project
Alleleanalyzer
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13
A software tool for personalized and allele-specific CRISPR editing.
Idmap1
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13
Motifscan
⭐
11
A motif discovery tool to detect the occurrences of known motifs
Reference Annotations
⭐
9
Makefile for reference annotations for genes & genomic regions
Cnvplot
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9
Plot CNV data with a genome viewer in R
Assembly
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8
This repository contains the reference genome assembly Ash1, built from data collected from an Ashkenazi individual.
Hic Inspector
⭐
8
HiC-inspector, a bioinformatics pipeline to facilitate the analysis of HiC dataset.
Codex
⭐
8
A normalization and copy number variation calling procedure for whole exome DNA sequencing data.
Uniprot Genome Annotations Hg19
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6
UniProt genome annotation data in hg19/GRCh37 coordinates
Rest_variantvalidator
⭐
6
REST Interface for VariantValidator. Includes docker container
Mojo
⭐
6
Fine Scale Mutation Spectrum
⭐
5
Bafextract
⭐
5
Myscripts
⭐
5
some scripts to be used again
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1-29 of 29 search results
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