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Search results for format vcf
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vcf
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23 search results found
Vcfr
⭐
225
Tools to work with variant call format files
Node Vcf
⭐
95
A not so forgiving vCard / vcf parser
Hadoop Bam
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66
Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework
Pyvcf
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58
A Variant Call Format reader for Python.
Gwasvcf
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36
Reading, querying and writing GWAS summary data in VCF format
Hapbin
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27
Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)
Biotoolbox
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27
Tools for querying and analysis of genomic data
Seqbreed
⭐
25
A python tool to evaluate genomic prediction in complex scenarios
Ivc
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17
Integrated Variant Caller
Dnacol
⭐
16
Color DNA/RNA bases in terminal output
Anno
⭐
15
Anno is a variant annotation tool
Ucscbeacon
⭐
10
A GA4GH Draft Beacon implementation
Vcf2sfs
⭐
9
R functions for generating site frequency spectra (SFS) from a VCF file.
Gwas Vcf Specification
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9
Specification for the GWAS-VCF format (manuscript in preparation)
File_conversions
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9
Scripts to convert between file formats for various analyses
Vcf Conversion Tools
⭐
8
Tools to convert to and from vcf format
Vcf2maf
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8
Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)
Vapor
⭐
7
Tool for the validation of structural genomic rearrangements using long read sequence data
Admixfrog
⭐
7
Ttplot
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6
Tao Yan's Plot Toolkit
Dosageconvertor
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6
DosageConvertor is a C++ tool to convert dosage files (in VCF format) from Minimac3/4 to other formats such as MaCH or PLINK.
Tomatula
⭐
6
Cflib
⭐
6
A library to create and handle counts files used with PoMo.
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1-23 of 23 search results
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