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Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

Close assembly gaps using long-reads at high accuracy.

Tourmaline ⭐ 32

Amplicon sequence processing workflow using QIIME 2 and Snakemake

Tailseeker ⭐ 18

Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer

Vesselexpress ⭐ 17

🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes

Snakemake_rnaseq ⭐ 8

A Snakemake pipeline to go from fastq mRNA sequencing files to raw and normalised counts (usable for downstream EDA and differential analysis)

Multiple_sclerosis_proj ⭐ 8

Data analysis platform/structure, machine learning/AI project for multiple sclerosis

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