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Search results for python dicom

168 search results found

DICOM Extraction for Large-scale Image Analysis (DELIA).

Cuckoopacs ⭐ 12

A mini-PACS web system using javascript and python

Mis Ai Accelerator ⭐ 11

Google Cloud Medical Imaging ML Development Accelerators

pycom --- Python DICOM Processing Toolkit

Radtorch ⭐ 11

Official repository for RADTorch - The Medical Imaging Machine Learning Framework

Dicom_parser ⭐ 11

Facilitates DICOM data access.

Tracks general documentation, standard operating procedures (SOP) and helper scripts for XNAT.

Picai_prep ⭐ 10

Preprocessing 3D medical images and image archives —geared towards prostate cancer detection in MRI.

Pyradlib ⭐ 10

Radiotherapy Software Library

Wsi2dicom ⭐ 10

Simple prototype of converting whole slide image (WSI) to multiframe DICOM images

Convert DICOM-RT dose matrices to EQD2 via Python

Pynetdicom2 ⭐ 10

Fork of the original pynetdicom that can be found here http://pynetdicom.googlecode.com.

Dicom_data_pipeline ⭐ 10

A production quality data pipeline for DICOM images segmentation.

Dicomgenerator ⭐ 10

Create DICOM images for use in testing. Based on pydicom

Xnat Pipelines ⭐ 9

XNAT pipelines repository

Dicompopulate ⭐ 9

Python script to send folder of DICOM files to a PACS through the DICOM protocol

Pybidsconv ⭐ 9

GUI based converter for MR dicoms to BIDS structure

Open source of Pyradiomics extension

Ultratrace ⭐ 9

A Free/Open-Source tool for manual annotation of Ultrasound Tongue Imaging data.

Cardionifti ⭐ 8

Software tools for DICOM preprocessing and NIfTI conversion

Orthanc Gdt ⭐ 8

Orthanc PACS server docker image with GDT interface

Dicom2ply ⭐ 8

Convert DICOM-RT Structures to a PLY Point Cloud

Dicom Database ⭐ 8

a Dockerized storage and send/receiver for dicom images, intended to easily work with pydicom/dicom-datasets

Dcmpandas ⭐ 8

A python library for loading dicom directories into pandas

Pyuprobe1 ⭐ 8

Python barebones for uProbe-1 ultrasound probe acquisitions

Convert tractography studies from mrtrix into dicom for use in navigation software

Dicom Exporter ⭐ 8

DICOM file converter in Python

Chrisreloaded ⭐ 8

Pynetdicom ⭐ 8

A pure Python DICOM network implementation

Oncodata_public ⭐ 7

Python wrappers for dicom conversion.

Ct Red_cnn_tensorflow ⭐ 7

Low-Dose CT with a Residual Encoder-Decoder Convolutional Neural Network (RED-CNN)

Flexible bidsificator for multimodal datasets

Pacsanini ⭐ 7

PACS and DICOM framework to identify, collect, and analyze data sets.

Segmentregistration ⭐ 7

3D Slicer extension for segment registration (aka fusion, contour propagation)

Uhg Plancheck ⭐ 7

A python tool to assist in checking radiotherapy treatment plans.

Dicom Csv ⭐ 7

Utils for gathering, aggregation and handling metadata from DICOM files

💧 Brachytherapy dose point calculations using the 2D TG-43 formalism

Topasdosecalc ⭐ 6

Add individual TOPAS DICOM doses, scale them to absolute doses, and compare to calculated TPS doses.

A python module that converts DICOM CT data to voxalized phantom for the EGSnrc Monte Carlo code DOSXYZnrc

Represent medical images as numpy array. Supported: .mhd (R/W),.xdr (R/W), dicom (R). Pure Python.

Bidsmanager ⭐ 6

Easily convert to, organize, and manage BIDS imaging data in Python

Dicom Metadata Extractor Serverless Datalake ⭐ 6

A serverless workflow to extract DICOM metadata to S3 and make it queryable via Athena.

Dicompyler Plugins ⭐ 6

Plugins repository for dicompyler

Create a BIDS structure for a DICOM folder.

Python script to generate Overlap Volume Histogram from a DICOM file

Qtim_preprocessor ⭐ 6

Resources and pipelines used for pre-processing medical imaging data at the Quantitative Tumor Imaging Lab at the Martinos Center (MIT/HST). Includes Docker resources.

Dvha Dicom Editor ⭐ 6

Simple DICOM tag editor built with wxPython and pydicom

Ct Cycle_idnetity_gan_tensorflow ⭐ 6

Cycle Consistent Adversarial Denoising Network for Multiphase Coronary CT Angiography

Lungcancerdiagnosis Pytorch ⭐ 6

Dicomslide ⭐ 6

Python library for reading whole slide images in DICOM format

Simpleitk Examples ⭐ 6

SimpleITK examples for python

Microview ⭐ 6

MicroView is a 3D image viewer and analysis tool

Medical Image Downloader ⭐ 6

🏥 Medical Image Downloader

Medical Imaging Data Structure (based on BIDS)

Django_mri ⭐ 6

A reusable Django app to manage MRI data.

PyTorch volume toolkit. Efficient data loading, dataset conversions, visualization tools

Sammba Mri ⭐ 5

small mammals brain MRI

Anatomicallandmarks ⭐ 5

Implementation of our MICCAI and invited IJCARS paper on detecting anatomical landmarks of the pelvis in X-ray images from arbitrary views.

Stanford open modules for python

Fmrif_tools ⭐ 5

Convert DICOM files into voxel, edit Minecraft style, 3D-print them.

Dicom_django_viewer ⭐ 5

TUTORIAL -> Django bootstrap 4 DICOM online viewer using python background

Dicomanager ⭐ 5

DICOM sorting and managing functionality written in python

Dicom Flask Uploader ⭐ 5

DICOM Image upload website using Flask

Dvha Mlca ⭐ 5

MLC Analyzer from DVHA as a Stand-Alone Script

Django_dicom ⭐ 5

A reusable django app to manage DICOM files.

Segmentation Eval ⭐ 5

Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.

Ct Denoising ⭐ 5

Rsna 2019 ⭐ 5

Dicomtreeqt5 ⭐ 5

Simple DICOM tag viewer

Mammogram Classification ⭐ 5

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