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13 search results found
Shasta
⭐
269
[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads
Sequana
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136
Sequana: a set of Snakemake NGS pipelines
Lstm_chem
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91
Implementation of the paper - Generative Recurrent Networks for De Novo Drug Design.
Sirius
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66
SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)
Bacass
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47
Simple bacterial assembly and annotation pipeline
Sirius Libs
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45
sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java
Lstm_peptides
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43
Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
Recycler
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41
This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33 by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir
Ramanet
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31
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
Pose
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10
A bare metal Python library for building and manipulating protein molecular structures
Cyclobranch
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7
A tool for mass spectrometry data analysis.
Novocaller
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6
Denovogui
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5
Graphical user interface for de novo sequencing of tandem mass spectra
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