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datavisualization
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Dash
⭐
19,976
Data Apps & Dashboards for Python. No JavaScript Required.
Awesome Single Cell
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2,784
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Multiqc
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1,159
Aggregate results from bioinformatics analyses across many samples into a single report.
React Plotly.js
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884
A plotly.js React component from Plotly 📈
Pycirclize
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476
Circular visualization in Python (Circos Plot, Chord Diagram)
Dash.jl
⭐
475
Dash for Julia - A Julia interface to the Dash ecosystem for creating analytic web applications in Julia. No JavaScript required.
Canvasxpress
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282
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
Karyoploter
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278
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
Intermine
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228
A powerful open source data warehouse system
Kent
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197
UCSC Genome Browser source tree. Stable branch: "beta".
Genome Spy
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150
A visualization grammar and GPU-accelerated toolkit for genomic data
Pandora
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127
PANDORA Advanced Machine Learning for Data Integration, Analysis, and Insightful Discoveries in Health and Disease 💻
Awesome Expression Browser
⭐
107
😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
Swne
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100
Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets
Dash Tools
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73
DashTools - Plotly Dash Command Line Tools - Create, Run and Deploy Templated Python Apps from Terminal
Cirrocumulus
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63
Bring your single-cell data to life
Geneview
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51
Genomics data visualization in Python by using matplotlib.
Ggvolc
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50
𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of interest with unprecedented ease. With just a single line of code, visualize complex datasets, gaining deeper insights and simplifying data representation
Pretzel
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36
Javascript full-stack framework for Big Data visualisation and analysis
Shinygeo
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35
Gene Expression Omnibus Analysis with Shiny 🔬
Csbb Shiny
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28
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics analysis
Cellguide
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22
🧭 Navigate single-cell RNA-seq datasets in your web browser.
Cellenium
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20
Cellenium is a FAIR and scalable interactive visual analytics app for scRNA-Seq data (single-cell RNA sequencing).
Biolitmap
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16
Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.
Hotmap
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13
WebGL Heatmap Viewer for Big Data and Bioinformatics
Lexicon Mono Seq
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13
DOM Text Based Multiple Sequence Alignment Library
Bacnet
⭐
12
BACNET is a Java based platform to develop website for multi-omics analysis
Efp Seq_browser
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12
An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictographic" (eFP) based on its RPKM expression level.
Baltic
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11
baltic - adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. This fork will no longer receive updates, so any further development to baltic is going to happen at https://github.com/evogytis/baltic.
Divbrowse
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10
A web application for interactive visualization and exploratory data analysis of variant call matrices
Biodata Club.github.io
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10
BioData Club website and project management
Cellscopes.jl
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9
A Julia package for single cell and spatial data analysis
Accusyn
⭐
9
AccuSyn: An Accurate Web-based Genome Synteny Browser
Poma
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8
📦 Tools for Omics Data Analysis
Emory Bmi Gsoc
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8
Emory BMI GSoC 2020 Project Ideas
Lakeview
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8
A Python library for creating publication-quality genomic visualisations
Karyoploter_tutorial
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8
Examples on how to use the karyoploteR R/Bioconductor package
Seal
⭐
8
SEAL db - Simple, Efficient And Lite database for NGS
Canvasxpress Js
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6
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
Logojs Package
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5
Javascript package for embedding sequence logos
Peptide Shaker Online
⭐
5
Web-based framework for interactive visual analysis of proteomics data
Polar Diagrams For Model Comparison
⭐
5
"Interactive Polar Diagrams for Model Comparison" by Aleksandar Anžel, Dominik Heider, and Georges Hattab
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