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Search results for data mining rna seq

5 search results found

Metasra Pipeline ⭐ 42

MetaSRA: normalized sample-specific metadata for the Sequence Read Archive

Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data

Omicselector ⭐ 26

OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.

Rpanglaodb ⭐ 17

An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.

Seq Pipeline ⭐ 12

Workspace for data science projects and NGS pipelines. Contains RStudio, Jupyter Notebook, VSCode and file manager. Can connect to Tailscale network to bypass firewalls.

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