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17 search results found

Flowkit ⭐ 114

A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces

A Python library for reading and writing Flow Cytometry Standard (FCS) files

Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effect and can be used for debarcoding or population discovery.

Gigasom.jl ⭐ 26

Huge-scale, high-performance flow cytometry clustering in Julia

Embedsom ⭐ 20

Fast embedding ot multidimensional datasets, great for cytometry data

A data-centric flow/mass cytometry automated analysis framework

Image Mass Cytometry analysis pipeline

An R package for analyzing high-dimensional cytometry data using the tidyverse.

Flowutils ⭐ 9

FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.

Tidyomics ⭐ 8

Easily install and load packages from the tidyomcis ecosystem

Integration of multi-batch cytometry datasets

Cite Seq_optimization ⭐ 7

Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments

Chronoclust ⭐ 7

A clustering algorithm that will perform clustering on each of a time-series of discrete datasets, and explicitly track the evolution of clusters over time.

Temporal clustering and tracking algorithm which fuses on FlowSOM and ChronoClust, specifically designed for analysing temporal cytometry data

Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.

graphical user interface for analysis and visualization of RT-DC data sets

Flowatlas.jl ⭐ 5

an interactive explorer for flow cytometry data

Related Searches

Python Cytometry (10)

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Cytometry Fcs (4)

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Cytometry Fcs Files (3)

1-17 of 17 search results

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