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43 search results found

Deep Learning Toolkit for Medical Image Analysis

Medicaldetectiontoolkit ⭐ 1,249

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

Fastmri ⭐ 1,197

A large-scale dataset of both raw MRI measurements and clinical MRI images.

Deep Learning For Medical Applications ⭐ 1,174

Deep Learning Papers on Medical Image Analysis

Niftynet ⭐ 1,170

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

Deepmedic ⭐ 968

Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans

Learning Deep Learning ⭐ 943

Paper reading notes on Deep Learning and Machine Learning

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

Neurite ⭐ 317

Neural networks toolbox focused on medical image analysis

2020 Cbms Doubleu Net ⭐ 207

DoubleU-Net for Semantic Image Segmentation in TensorFlow & Pytorch (Nominated for Best Paper Award (IEEE CBMS))

Deeplearing Interview Awesome 2024 ⭐ 196

We'll cover some of the most common Deep Learning Interview Questions and answers and provide detailed answers to help you

Pneumonia Detection From Chest X Ray Images With Deep Learning ⭐ 140

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

Livianet ⭐ 133

This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"

"pip install unet": PyTorch Implementation of 1D, 2D and 3D U-Net architecture.

Resunetplusplus With Crf And Tta ⭐ 106

Official implementation of ResUNet++, CRF, and TTA for segmentation of medical images (IEEE JBIHI)

Quicknat_pytorch ⭐ 99

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

Open source Python library for building bioimage analysis pipelines

Cnn_design_for_ad ⭐ 67

Code for "Generalizable deep learning model for early Alzheimer’s disease detection from structural MRIs"

Cnn Dicom Segmentation ⭐ 57

DICOM Image Segmentation with CNNs in Tensorflow

Image Registration Cnn ⭐ 51

A pytorch implementation of CNN based MRI image registration based on Christodoulidis Stergios et al. "Linear and Deformable Image Registration with 3D Convolutional Neural Networks", 2018.

Semidensenet ⭐ 48

Repository containing the code of one of the networks that we employed in the iSEG Grand MICCAI Challenge 2017, infant brain segmentation.

Implementation of the paper: Deep-learning-assisted diagnosis for knee magnetic resonance imaging: Development and retrospective validation of MRNet

Medical_image_segmentation ⭐ 43

Medical image segmentation ( Eye vessel segmentation)

Duck Net ⭐ 41

Using DUCK-Net for polyp image segmentation. ( Nature Scientific Reports 2023 )

Nocodeseg ⭐ 37

🔬 Code-free deep segmentation for computational pathology

Deep Learning Liver Segmentation ⭐ 35

Application of Deep Learning to the segmentation of medical images

Data Consistency Toolbox for Magnetic Resonance Imaging

(ICVGIP' 18 Oral Paper) Classification of thoracic diseases on ChestX-Ray14 dataset

Thyroid Us ⭐ 28

Evaluation of Thyroid Nodules Seen on Ultrasound Using Multi-task Deep Convolutional Neural Network (CNN)

Hippmapp3r ⭐ 27

AICONSlab's hippocampal segmentation algorithm using CNNs

Skin Cancer Classification Using Deep Learning ⭐ 26

Classify Skin cancer from the skin lesion images using Image classification. The dataset for the project is obtained from the Kaggle SIIM-ISIC-Melanoma-Classification competition.

Multiresunet ⭐ 26

MultiResUNet implementation in PyTorch; MultiResUNet: Rethinking the U-Net Architecture for Multimodal

Diabetic Retinopathy Detection ⭐ 26

DIAGNOSIS OF DIABETIC RETINOPATHY FROM FUNDUS IMAGES USING SVM, KNN, and attention-based CNN models with GradCam score for interpretability,

Nn Common Modules ⭐ 22

Pytorch Implementations of Common modules, blocks and losses for CNNs specifically for segmentation models

Coursera Ai For Medicine Specialization ⭐ 22

Programming assignments, labs and quizzes from all courses in the Coursera AI for Medicine Specialization offered by deeplearning.ai

Ptl Oar Segmentation ⭐ 20

Boilerplate for PyTorch Lightning based medical-image segmentation pipeline for to enable automated segmentation of organs-at-risk (in head and neck cancer) by using Simple Open-Source 3D CNNS

Cardiacsegmentationpropagation ⭐ 19

Code for cardiac segmentation

This is supplementary material for the manuscript: "Lung Pattern Classification for Interstitial Lung Diseases Using a Deep Convolutional Neural Network" M. Anthimopoulos, S. Christodoulidis, L. Ebner, A. Christe and S. Mougiakakou, IEEE Transactions on Medical Imaging (2016)

Image Recognition System ⭐ 18

✨基于 3D 卷积神经网络(CNN)的阿尔兹海默智能诊断 Web 应用 Alzheimer's Intelligent Diagnosis Web Application based on 3D Convolutional Neural Network and the ADNI Dataset ✨ 🚩(with README in English) 📌含在线demo：医学影像识别系统，图像识别可视化界面，OCR，快速部署深度学习模型为网页应用，W

🚀 H2G-Net: Segmentation of breast cancer region from whole slide images

Brain Tumor Segmentation Keras ⭐ 16

Keras implementation of the multi-channel cascaded architecture introduced in the paper "Brain Tumor Segmentation with Deep Neural Networks"

Large Scale Multi Class Image Based Cell Classification With Deep Learning ⭐ 14

Large-Scale Multi-Class Image-Based Cell Classification with Deep Learning

Yeap16 Ai 3d Printing ⭐ 14

CNN's for bone segmentation of CT-scans.

Retinal Disease Diagnosis With Residual Attention Networks ⭐ 13

Using Residual Attention Networks to diagnose retinal diseases in medical images

Icvmapp3r ⭐ 12

AICONSlab's brain extraction (skull-stripping) algorithm using CNNs

Machine Learning In Medical Imaging U Net ⭐ 12

TUM_MLMI_SS16: Convolutional Neural Network using U-Net architecture to predict one modality of a brain MRI scan from another modality.

3D cerebrovascular volume segmentation in Pytorch.

Diabetic Retinopathy Feature Extraction and Binary Diagnosis

Radtorch ⭐ 11

Official repository for RADTorch - The Medical Imaging Machine Learning Framework

MIST: A simple, fully automated framework for 3D medical imaging segmentation.

Uncertainty Estimation Diabeticretinopathy ⭐ 10

Estimating uncertainty of neural networks for automated screening of Diabetic Retinopathy using the PyTorch framework. Generated visual explanation of the deep learning system to convey the pixels in the image that influences its decision Integrated Gradient method.

Sub Cortical_segmentation ⭐ 10

Sub-cortical brain tissue segmentation using CNN

Cnn Chest X Ray Abnormalities Localization ⭐ 9

Using CNN, transfer learingn and attribution methods to localize abnormalities on x-ray chest images.

Miccai Educational Challenge 2019 ⭐ 8

Tutorial about combining PyTorch and NiftyNet for deep learning and medical image computing

Blood Cell Subtypes Classification ⭐ 7

Using deep learning and CNN model

Medicalcnn ⭐ 7

Abnormality detection in mammogram images using Deep Convolutional Neural Networks

An attention-based Multi-Scale Feature Learning Framework for Multimodal Medical Image Fusion

Classic Augmentation Based Classifier Generative Adversarial Network (CACGAN) for COVID-19 Diagnosis

Pytorch Unet Brain Cancer Segmentation ⭐ 5

Creating a U-Net In PyTorch to segment the BraTS 2020 dataset

Hegnnenhancecnn ⭐ 5

Graph + Image Bimodal Deep Learning for Histology Image Classification

Pranet Polyps Segmentation ⭐ 5

Implementation of research paper : "PraNet: Parallel Reverse Attention Network for Polyp Segmentation" in Tensorflow

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