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Search results for variants conda
conda
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variants
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1 search results found
Sarek
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299
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Megalodon
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172
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.
Saige
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140
Vcf Kit
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107
VCF-kit: Assorted utilities for the variant call format
Princess
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74
Lorikeet
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61
Strain resolver for metagenomics
Cadd Scripts
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50
CADD scripts release for offline scoring. For more information about CADD, please visit our website
Mtbseq_source
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32
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
Persvade
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27
perSVade: personalized Structural Variation detection
Varianttools
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27
software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
Tensorflow_recipes
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27
Tensorflow conda recipes
Crg2
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15
Research pipeline for exploring clinically relevant genomic variants
Crispritz
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14
Tool package to perform in-silico CRISPR analysis and assessment
Steve
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10
Go Feedstock
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7
A conda-smithy repository for go.
Germline_variant_snakemake
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5
Snakemake workflow to call germline variant
Finsurf
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5
FINSURF is a tool designed to analyse lists of sequences variants in the human genome.
Seqcat
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5
A Bioconductor R-package for cell evaluation, characterisation and authentication using high throughput sequencing data.
Variant_calling_in_cancer_genomes_seminar
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5
Variant Calling in Cancer Genomes
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