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Search results for conda slurm

11 search results found

Nextflow ⭐ 2,447

A DSL for data-driven computational pipelines

Quickstart ⭐ 61

https://tacc.ust.hk

Pipelines Nextflow ⭐ 41

A set of workflows written in Nextflow for Genome Annotation.

Wochenende ⭐ 30

Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3

Stag Mwc ⭐ 24

StaG Metagenomic Workflow Collaboration

Qhub Hpc ⭐ 22

Assemblycomparator2 ⭐ 20

🦠📇 Compare prokaryotic genomic assemblies

Gwf Utilization ⭐ 7

Calculate utilization of allocated resources in a gwf workflow

Great_lakes_slurm ⭐ 7

Using the Great Lakes cluster and batch computing with SLURM

Remap Pipeline ⭐ 7

As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMap team and external teams. This is essential for future collaborative production efforts. Briefly, our pipelines uses SnakeMake either in a Conda or Singularity environment depending on the HPC resources, where Torque and Slurm managers are both supported

Monitoring Tool for HPC metrics from batch scheduler and BMC resources

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