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8 search results found

Graph Theory ⭐ 178

Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS

Generalized SEIR Epidemic Model (fitting and computation)

A tool for modeling infectious diseases.

A free, open-source tool for modeling chemical reaction networks in Python

Compyrtment ⭐ 8

A simple Python library for compartment models

T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife 2017; 6:e26517

Simulators ⭐ 6

Simulators for Compartmental Models in Epidemiology

The Flexible Epidemic Modeling Pipeline

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