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Search results for cloud computing bioinformatics

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6 search results found

Nextflow ⭐ 2,447

A DSL for data-driven computational pipelines

A language and runtime for distributed, incremental data processing in the cloud

Cromwell ⭐ 944

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Workflow Description Language - Specification and Implementations

Arvados ⭐ 354

An open source platform for managing and analyzing biomedical big data

Gcp Essentials ⭐ 208

Sample code and notes for my GCP courses on LinkedIn Learning

Gcp For Bioinformatics ⭐ 178

GCP for Bioinformatics Researchers

Biojupies ⭐ 94

Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.

Robust and efficient workflows using a simple language agnostic approach

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

Butler is a framework for running scientific workflows on public and academic clouds.

Lynnlangit ⭐ 59

Lynn Langit profile

Teamteri ⭐ 50

Genomics (computational bioinformatic data analysis) running on GCP, AWS or Azure

Sevenbridges Python ⭐ 44

SevenBridges Python Api bindings

Metaspace ⭐ 39

Cloud engine and platform for metabolite annotation for imaging mass spectrometry

Bisqueucsb ⭐ 33

An ML Platform for storing, analyzing, and visualizing your data all in the browser.

Sevenbridges R ⭐ 27

Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R

A tool for running bioinformatics workflows locally or in the cloud.

Afternotes ⭐ 24

Afternotes for the attended courses at Ca' Foscari University, master in Data Management and Analytics.

Toolchest Client Python ⭐ 13

Toolchest Python client

Cloudconductor ⭐ 13

CloudConductor is a workflow management system that generates and executes bioinformatics pipelines

바닥부터 시작하는 R + 바이오인포

Intelligent and cost-effective bidding on cloud computing instances for bioinformatics pipelines.

Cloud Vm Workshop ⭐ 8

Material for the ELIXIR EXCELERATE workshop "Using clouds and VMs in bioinformatics training"

Documentation on St. Jude Cloud.

Efficient Variant Analysis

Genomic Bigdata Spark ⭐ 5

Genomic BigData Warehousing with Apache Spark and LakeHouse Architecture

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