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4 search results found

Emg Viral Pipeline ⭐ 98

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

Taxprofiler ⭐ 78

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

Taxtriage ⭐ 11

TaxTriage is designed in concordance with CDC recommendations to provide clinical environments the necessary tools to generate classification reports (using Kraken2) in a metagenomics scope. It is bundled with Nextflow to provide a seamless installation and usage experience. It is currently being developed as an alpha version and is intended for a full release by October of 2022

Nf Repeatmasking ⭐ 5

Nextflow workflow for automatic repeat detection, classification and masking

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