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LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

Spatial Model Editor ⭐ 14

Spatial bio-chemical reaction model editor and simulator

Spatial Sbml ⭐ 7

libraries & tools for spatial simulation of SBML models

Copasi Dependencies ⭐ 7

Collection of OpenSource libraries to simplify COPASI build

A simulator for biological and physiological models

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