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Search results for c plus plus phylogenetics
c-plus-plus
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phylogenetics
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16 search results found
Raxml Ng
⭐
339
RAxML Next Generation: faster, easier-to-use and more flexible
Hyphy
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190
HyPhy: Hypothesis testing using Phylogenies
Iq Tree
⭐
125
Efficient phylogenomic software by maximum likelihood
Usher
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112
Ultrafast Sample Placement on Existing Trees
Phyx
⭐
100
phylogenetics tools for linux (and other mostly posix compliant) computers
Cafe
⭐
71
Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.
Genesis
⭐
54
A library for working with phylogenetic and population genetic data.
Gappa
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49
A toolkit for analyzing and visualizing phylogenetic (placement) data
Phylonium
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19
♥ Fast and Accurate Estimation of Evolutionary Distances
Root_digger
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19
A tool to root phylogenies
Sts
⭐
15
Sequential Tree Sampler for online phylogenetics
Rncl
⭐
8
An R interface to the Nexus Class Library (C++) to read in quickly large phylogenetic trees and data
Kleuren
⭐
8
Find bubbles in the Colored de Bruijn Graph to reconstruct phylogenetic trees
Linearham
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7
A Bayesian Phylo-HMM for B cell receptor sequence analysis
Hmmufotu
⭐
6
An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing
Quartet
⭐
6
R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)
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