Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for brain imaging
brain-imaging
x
54 search results found
Nilearn
⭐
1,076
Machine learning for NeuroImaging in Python
Nipype
⭐
707
Workflows and interfaces for neuroimaging packages
Fmriprep
⭐
599
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Nibabel
⭐
598
Python package to access a cacophony of neuro-imaging file formats
Neuromaps
⭐
193
A toolbox for comparing brain maps
Neuromorphic Computing Guide
⭐
191
Learn about the Neumorphic engineering process of creating large-scale integration (VLSI) systems containing electronic analog circuits to mimic neuro-biological architectures.
Tedana
⭐
149
TE-dependent analysis of multi-echo fMRI
Clinicadl
⭐
146
Framework for the reproducible processing of neuroimaging data with deep learning methods
Bidscoin
⭐
110
BIDScoin converts your source-level neuroimaging data to BIDS
Mindboggle
⭐
104
Automated anatomical brain label/shape analysis software (+ website)
Quicknat_pytorch
⭐
99
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
Braingraph
⭐
94
Graph theory analysis of brain MRI data
Neurovault
⭐
88
Easy to use web database for statistical maps.
3d Nii Visualizer
⭐
60
A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5
Templateflow
⭐
58
The TemplateFlow Archive - A DataLad super-dataset
Braineigenmodes
⭐
57
Code supporting 'Geometric constraints on human brain function'
Deepslice
⭐
56
A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
Unet_3d
⭐
56
3D Unet Equipped with Advanced Deep Learning Methods
Netneurotools
⭐
47
Useful tools from the Network Neuroscience Lab
Brats18 Project
⭐
42
Brain tumor segmentation using fully-convolutional deep neural networks.
Pi2
⭐
41
C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
Brain Coloring
⭐
38
BrainPainter - Brain Visualisation Software
Explorepy
⭐
37
Python API for Mentalab biosignal aquisition devices
Coleanticevicnetpartition
⭐
37
Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
Assemblynet
⭐
31
AssemblyNet: 3D Whole Brain MRI segmentation pipeline
Tractor
⭐
28
Magnetic resonance imaging and tractography with R
Synthtorch
⭐
26
deep neural network-based image translation/synthesis
Brain Mri Segmentation
⭐
25
Smart India Hackathon 2019 project given by the Department of Atomic Energy
Brain Segmentation
⭐
24
Brain Segmentation on MRBrains18
Dash Brain Surface Viewer
⭐
24
Dash app for viewing brain surfaces saved as MNI files. Data from https://github.com/aces/brainbrowser
Graph_saliency_maps
⭐
24
Graph saliency maps through spectral convolutional networks for brain mapping
Ravel
⭐
24
Intensity normalization of structural MRIs using RAVEL
Brainy
⭐
21
Brainy is a virtual MRI analyzer. Just upload the MRI scan file and get 3 different classes of tumors detected and segmented. In Beta.
Zeffiro_interface
⭐
21
Interface for using finite elements in inverse problems with complex domains
Nftsim
⭐
16
C++ library for simulation of multiscale neural field dynamics
Mouse Brain Templates
⭐
15
Generate a package-manager-friendly mouse brain atlases collection.
Neuroscout
⭐
14
NeuroScout web app and API
Sourcemesh
⭐
13
A multipurpose matlab-based MEG/EEG overlay & network plotter
Scousetom
⭐
13
Open Source EIT system using Keithley 6221 current source and EEG systems
Neuroscience
⭐
11
Naive journal of computer engineering student who is trying to know more about brain science.
Difumo
⭐
11
Dictionary of Functional Modes for brain imaging
Stroke_eit_dataset
⭐
11
Processing and directory structure for Stroke EIT Dataset
Fmri_roi_analysis_tool
⭐
10
An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usage includes the creation of regional maps of temporal signal to noise ratio.
Sub Cortical_segmentation
⭐
10
Sub-cortical brain tissue segmentation using CNN
Pysnirf2
⭐
10
Python package for reading, writing and validating Shared Near Infrared Spectroscopy Format (SNIRF) files
Hierarchical Brain Networks
⭐
9
Determining the Hierarchical Architecture of the Human Brain Using Subject-Level Clustering of Functional Networks
Bwas
⭐
7
A Python software package for BWAS
Paint4brains
⭐
7
A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.
Braineigenmodes_legacy
⭐
7
Code supporting 'Geometric constraints on human brain function'
Residual_mlp_cnn_mixer
⭐
7
(MICCAI 2022) PyTorch implementation of Denoising of 3D MR images using a voxel-wise hybrid residual MLP-CNN model to improve small lesion diagnostic confidence.
Brain Coloring Website
⭐
6
BrainPainter Website code
Mni_to_atlas
⭐
5
A simple Python-based tool for finding brain atlas regions based on MNI coordinates.
Stereotaxyz
⭐
5
Toolkit for the Empirical Design of Stereotactic Brain Implants
Automatedfreesurfer
⭐
5
1-54 of 54 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.