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Search results for bioinformatics slurm
bioinformatics
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slurm
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16 search results found
Nextflow
⭐
2,447
A DSL for data-driven computational pipelines
Juicer
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313
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Smk Simple Slurm
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80
A simple Snakemake profile for Slurm without --cluster-config
Bionix
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66
Functional highly reproducible bioinformatics pipelines
Slurmr
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50
slurmR: A Lightweight Wrapper for Slurm
Wochenende
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30
Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3
Bioinformaticsintroduction
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22
Assemblycomparator2
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20
🦠📇 Compare prokaryotic genomic assemblies
Rnaseq Pipeline
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18
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
Informme
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15
An information-theoretic pipeline for methylation analysis of WGBS data
Longbow
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14
Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.
Phylotoast
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12
Tools for phylogenetic data analysis including visualization and cluster-computing support.
Cpg_me
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10
A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to a CpG count matrix (Bismark cytosine reports)
Bioluigi
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9
Reusable and maintained Luigi tasks to incorporate in bioinformatics pipelines
Canine
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6
A modular, high-performance computing solution to run jobs using SLURM
Ansible Slurm Climb
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5
Ansible playbook for installing SLURM based cluster on CLIMB (Cloud Infrastructure for Microbial Bioinformatics)
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1-16 of 16 search results
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