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Search results for bioinformatics refseq

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7 search results found

Genome_updater ⭐ 123

Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy

Referenceseeker ⭐ 85

Rapid determination of appropriate reference genomes.

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more

Metacache ⭐ 49

memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping

Bioproviders ⭐ 21

F# library for accessing and manipulating bioinformatic datasets.

Fast and space-efficient taxonomic classification of long reads

fast classification of metagenomic sequences with lightweight de Bruijin graph-based reference indexing

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