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Search results for machine learning bioinformatics
bioinformatics
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machine-learning
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132 search results found
Pathway Forte
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10
A Python package for benchmarking pathway database with functional enrichment and classification methods
Youtube
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9
Collection of YouTube videos on data science on the Data Professor YouTube channel.
Tome
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9
A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima
Pymultiomics
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9
Python toolbox for multi-omics data mapping and analysis
Toxinpred2
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8
An improved method for predicting toxicity of proteins
Adversarial Gene Expression
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8
Adversarial generation of gene expression data using Generative Adversarial Networks
Orca
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8
Origin of Chromosomal Replication Assessment. Python tool for the analysis of circular bacterial DNA sequences in order to find their origin of replication.
Emory Bmi Gsoc
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8
Emory BMI GSoC 2020 Project Ideas
Deepbio
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8
This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list.
All Subtype Classification
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8
A Fast and Efficient CNN Model for B-ALL Diagnosis and its Subtypes Classification using Peripheral Blood Smear Images
A Sparse Coding Based Approach For Class Specific Feature Selection
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8
A novel Sparse-Coding Based Approach Feature Selection with emphasizing joint l_1,2-norm minimization and the Class-Specific Feature Selection.
Awesome Ml For Biochemistry
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8
Community-curated resources for research at the intersection of AI and molecular sciences
Poma
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8
📦 Tools for Omics Data Analysis
Gcgc
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8
An ML-feature processing library for biological sequences.
Target Pred Py
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7
A simple machine learning model for small-molecule target prediction in Python.
Refdnn
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7
RefDNN: a reference drug based neural network for more accurate prediction of anticancer drug resistance (Scientific Reports)
Candycrunch
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7
Predicting glycan structure from LC-MS/MS data
Bipspi
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7
Partner specific prediction of protein binding sites
Metabolitics Breast Cancer Case Study
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7
a research project
Phage Host Prediction
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7
Published in PLOS ONE. We show that using embeddings of receptor-binding proteins presents improvements over handcrafted genomic and protein sequence features for phage-host interaction prediction — with the highest performance obtained using the transformer-based protein language model ProtT5
Pilsl
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6
PiLSL is a pairwise interaction learning-based graph neural network (GNN) model for prediction of synthetic lethality (SL) as anti-cancer drug targets. It learns the representation of pairwise interaction between two genes from a knowledge graph (KG).
Apta Mcts
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6
Supporting code for the paper "Predicting aptamer sequences that interact with target proteins using an Aptamer-Protein Interaction classifier and a Monte-Carlo tree search approach". Please issue for any errors or helps.
Knowseq
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6
KnowSeq R package
Clinvar Kaggle
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6
Scripts related to the ClinVar conflicting classifications dataset on Kaggle
Rnaglib
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6
Datasets and analysis tools for RNA 3D and 2.5D structures.
I529
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6
Machine learning for Bioinformatics Lab module
Raku For Bioinformatics
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6
Raku/Perl6 resources for bioinformatics
Microbiome Summer School 2017
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5
Introduction to Machine Learning
Cubat
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5
This project is no longer being updated and has been discontinued.
Ppaxe
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5
Text mining tool to retrieve protein-protein interactions from the scientific literature.
Awesome Ai
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5
Awesome list for all things AI, ML and deep learning
Landmark
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5
Implementation of a decision tree ensemble which splits each node using learned linear and non-linear functions.
Binding_in_disorder
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5
Prediction of Binding Residues in Disordered Regions Based on Protein Embeddings; TUM Master Praktikum Bioinformatics 2022 (Project #3) and Master's Thesis
Movis
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5
MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dominik Heider, and Georges Hattab
Precogx
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5
A predictor of GPCR couplings with G-proteins/B-arrs using Transformers
Polar Diagrams For Model Comparison
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5
"Interactive Polar Diagrams for Model Comparison" by Aleksandar Anžel, Dominik Heider, and Georges Hattab
Cancertherapy
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5
To use deep learning to identify patients whose tumor DNA mutations “look similar to” other tumors for which treatments are effective.
Ps4 Dataset
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5
The largest open-source dataset for Protein Single Sequence Secondary Structure prediction.
Seqdata
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5
Annotated sequence data
Enzyme Classification
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5
Predict the enzyme class of a given FASTA sequence using deep learning methods including CNNs, LSTM, BiLSTM, GRU, and attention models along with a host of other ML methods.
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101-132 of 132 search results
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