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9 search results found

Snakefiles ⭐ 58

🐍 Snakefiles for common RNA-seq data analysis workflows.

Flashweave.jl ⭐ 52

Inference of microbial interaction networks from large-scale heterogeneous abundance data

G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.

Rabbittclust ⭐ 28

RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches

Fastheatmap ⭐ 23

Super high performance interactive heatmap software

Bioviewer ⭐ 23

Protein (.pdb, .cif and .fasta) viewer for iPhone, iPad and Mac, using SwiftUI + Metal.

Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.

Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.

A modular, high-performance computing solution to run jobs using SLURM

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Python Bioinformatics (1,701)

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