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10 search results found

Fastp ⭐ 1,602

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging.

Afterqc ⭐ 157

Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

HTS-compatible wrapper for IgBlast V-(D)-J mapping tool

Illumina450k_filtering ⭐ 25

A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays

ASAP : Automated Single-cell Analysis Pipeline

Microbiomer ⭐ 17

A comprehensive R package for microbiome analysis.

Mapping-free software for fishing relevant reads in an RNA-Seq sample

Gap2Seq is a gap filling and insertion genotyping tool.

Pylazybam ⭐ 7

A pure python lazy BAM parser

Metasequencing ⭐ 5

A metagenomics pipeline using the CGAT framework.

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